Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  170 bits (431), Expect = 3e-47
 Identities = 91/285 (31%), Positives = 152/285 (53%), Gaps = 6/285 (2%)

Query: 12  FAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFYAQC 71
           F  + + +SFT A   LG+S + VS+Q+ ALE  L  KL+ RTTR  ++T+ G+L+Y  C
Sbjct: 10  FVAVAETESFTKAGKRLGISTAQVSRQVGALEQRLDTKLLYRTTRKVSMTEEGHLYYRHC 69

Query: 72  RELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVHLFD 131
           R++L  +  A+  +   R    GL+R+    ++G  ++LP +      YP + V++ L +
Sbjct: 70  RQVLDGLEEAERALSSLRGLPQGLLRMTAPVAYGEKYILPVVNDFLLAYPNVEVDIALTN 129

Query: 132 HKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALMEHNC 191
            +V ++  G+DL I   +      +A+RI+     V ASPDYL R+G P     L  HNC
Sbjct: 130 RQVRLVDAGIDLAIRIGKLADSSLIAKRISQRINYVCASPDYLKRFGEPHSLSELSRHNC 189

Query: 192 LIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLRDEF 251
           LI      DY  W F   G  + +K+ GN   +    +RDAA+ G G+  L  Y +  + 
Sbjct: 190 LI---GNHDY--WRFLEQGRERQLKIKGNLRCNTGHGLRDAALKGLGLVQLPNYYIGQDL 244

Query: 252 RTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL 296
           + G+L+ +L  +    +   +A+YP  +H+  K   ++EF+ + L
Sbjct: 245 KAGRLVSVLNAYQEPNE-GVWALYPQNRHLSPKVKLMVEFLDRAL 288