Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  289 bits (740), Expect = 5e-83
 Identities = 142/312 (45%), Positives = 206/312 (66%), Gaps = 3/312 (0%)

Query: 4   ERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDA 63
           E    +A+F  + +  SF++AA  LG+S S VS Q+A LE  LGV+L+QRTTRS +LT+A
Sbjct: 3   ELLEPIAIFTHVARAGSFSSAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEA 62

Query: 64  GNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPEL 123
           G L YAQ  ELL     A + + +  D   G++++G+SQSFGT+H++PAL     ++PEL
Sbjct: 63  GQLLYAQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPDFMARHPEL 122

Query: 124 NVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEP 183
            ++V L DHKVD++ EGLDL +T +EQLP G VA+ +  C+F++AASP+Y+ ++G P  P
Sbjct: 123 ELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLAASPEYVAKHGYPERP 182

Query: 184 MALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLA 243
             L++HNCL+Y     +++ W F +      I V+GN+ VD A A++ AAV+G G+ YLA
Sbjct: 183 EQLVDHNCLVYHGEWHEHSVWQFKKGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLA 242

Query: 244 TYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWD 303
           +YLL +E   G L+ LLPEW     +P  AVYP R+H+  K SA I+FIK  +G+P YWD
Sbjct: 243 SYLLENEIEKGTLVPLLPEWQLTHHLPLQAVYPRRKHLAPKVSAFIDFIKDHIGSPPYWD 302

Query: 304 TRLQPYVRFAAE 315
              +PY    A+
Sbjct: 303 ---EPYAALYAQ 311