Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  285 bits (730), Expect = 8e-82
 Identities = 139/312 (44%), Positives = 203/312 (65%), Gaps = 3/312 (0%)

Query: 4   ERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDA 63
           E    +A+F  + +  SF+AAA  LG+S S VS Q+A LE  LGV+L+QRTTRS +LT+A
Sbjct: 3   ELLEPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEA 62

Query: 64  GNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPEL 123
           G+L Y Q  ELL     A + + +  D   G++++G+SQSFG +H++PAL     ++PEL
Sbjct: 63  GHLLYLQGEELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIPALPSFMAKHPEL 122

Query: 124 NVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEP 183
            ++V L DHKVD++ EGLDL +T +EQLP G VA+ +  C+F++ ASPDY+ ++G P+ P
Sbjct: 123 ELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPDYIAKHGEPSRP 182

Query: 184 MALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLA 243
             L++HNCL+Y+    +++ W F +      I V+GN+ VD A A++ AA++G G+ YLA
Sbjct: 183 EQLVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVYLA 242

Query: 244 TYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWD 303
           +YL+ DE   G L+ LL +W     +P  AVYP R+H+  K SA IEFIK  +G P YWD
Sbjct: 243 SYLMEDEIAKGTLVPLLKDWQLTHHLPLQAVYPRRKHLAPKVSAFIEFIKDHIGNPPYWD 302

Query: 304 TRLQPYVRFAAE 315
               PY    +E
Sbjct: 303 I---PYAELFSE 311