Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  189 bits (480), Expect = 7e-53
 Identities = 98/294 (33%), Positives = 167/294 (56%), Gaps = 2/294 (0%)

Query: 4   ERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDA 63
           E  S + +F  +++  SF+ A   LG+S S +SK+++ LE  LG++L+QRTTRS +LTDA
Sbjct: 2   EHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDA 61

Query: 64  GNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPEL 123
           G  ++   R  + +       + + +    G +R+ +   FG L++ P + +  ++YP++
Sbjct: 62  GARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDI 121

Query: 124 NVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEP 183
            +++ + D   D++  G DL I   E      +A++IA C  V+ ASP YL ++G P  P
Sbjct: 122 QLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTP 181

Query: 184 MALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLA 243
             L +HNCL Y S+ +D   WSF      Q ++  GNY V+ ++A+  A + G GIA L 
Sbjct: 182 CELTQHNCLFY-SYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLP 240

Query: 244 TYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLG 297
            +++  + +TG L  LL ++   +    YAVYP R++ P K + +IEF+  +LG
Sbjct: 241 RFIVEPDLQTGHLQALLTDYPLPEH-GIYAVYPQRKYQPTKVTVLIEFLMAKLG 293