Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  188 bits (478), Expect = 1e-52
 Identities = 96/295 (32%), Positives = 169/295 (57%), Gaps = 2/295 (0%)

Query: 4   ERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDA 63
           E  S + +F  +++  SF+AA   LG+S S +SK++  LE  LG++L+QRTTRS +LTDA
Sbjct: 2   EHFSALPIFVTVVECGSFSAAGQKLGLSKSAISKRITQLEQHLGIQLLQRTTRSLSLTDA 61

Query: 64  GNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPEL 123
           G  ++   R  + +       + + +    G +R+ +   FG L++ P + +  ++YP++
Sbjct: 62  GARYFEYIRPAVQLTQEGLDAISELQQTPKGNLRISVPMVFGRLYIAPLIAEFLKRYPDI 121

Query: 124 NVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEP 183
            +++ + D   D++  G DL I   E      +A++IA C  V+ ASP YL ++GSP  P
Sbjct: 122 QLQMQMDDKTTDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLAQHGSPMTP 181

Query: 184 MALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLA 243
             L +HNCL Y S+ +D   WSF      Q ++  GNY V+ ++A+  A + G GIA L 
Sbjct: 182 SGLTQHNCLFY-SYFQDGVEWSFHSPYGVQRVQPKGNYQVNNSDAIHQACLDGLGIANLP 240

Query: 244 TYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGT 298
            +++  + + G+L  +L ++   +    YAVYP R+++P K + +I F+ ++L +
Sbjct: 241 RFIVESDLQAGRLQTILTDFPLPEH-GIYAVYPQRKYLPTKVTVLIGFLMEKLAS 294