Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  171 bits (434), Expect = 1e-47
 Identities = 93/285 (32%), Positives = 153/285 (53%), Gaps = 6/285 (2%)

Query: 12  FAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFYAQC 71
           F  + + ++FT AA  L VS +HVS+Q+ ALE  LG KL  RTTR  +LT+ G ++Y  C
Sbjct: 10  FVAVAEVENFTLAALRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69

Query: 72  RELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVHLFD 131
           R+L T +  A+  + D +    GL++L    ++G   ++P L     QYP +   V L +
Sbjct: 70  RQLQTGLEEAERAITDLKGSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVEFNVDLTN 129

Query: 132 HKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALMEHNC 191
             +D+++ G DL I   +      +A+ ++     VAASP Y+ +YG P     L +HNC
Sbjct: 130 RTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQHNC 189

Query: 192 LIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLRDEF 251
           LI      ++  W F  +G  + IKV GN   +   A+RDAA+ G GI  L  Y + ++ 
Sbjct: 190 LI-----GNHNYWRFIENGRERNIKVRGNLICNSGYALRDAALKGIGIVQLPDYYIEEDI 244

Query: 252 RTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL 296
             G+LI  L +     +   +A+YP  +H+  K   +++++ ++L
Sbjct: 245 HAGRLISFL-DAHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKL 288