Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., nucleoside transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  440 bits (1132), Expect = e-128
 Identities = 227/417 (54%), Positives = 308/417 (73%), Gaps = 15/417 (3%)

Query: 4   VMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGA 63
           ++ SL+G+  +L + +L S N+K I++R V  AL +Q  F   VLYVP GK+ L  V+  
Sbjct: 3   ILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVSDG 62

Query: 64  VSQLINYGQDGIGFVFGGLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIG 123
           VS +I YGQ+GI F+FG LA   VGF+FAINVL +IIFFS+LI+ LY+LGIM  VI +IG
Sbjct: 63  VSAVIGYGQNGINFLFGDLAQFKVGFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIRIIG 122

Query: 124 GGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLASVAGGTL 183
           GGLQK LGT R ES+SATANIFVG  EAPLVV+P++  MT S+ FA+M GGLAS+AG  L
Sbjct: 123 GGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGSVL 182

Query: 184 VGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVEAIA 243
            GYAS+GV++ YL+AA+FM+AP GLLMAK+M PETE+    + +   D  K  NV++A A
Sbjct: 183 AGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLDAAA 242

Query: 244 DGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIE-LSFELIMGYVFAPVAWLI 302
            GA SG+ +A+ VGA L+AFV +IA++NG++G  GGWFG+E L+ ELI+GY+F P+A+LI
Sbjct: 243 AGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLI 302

Query: 303 GIPWHEAITAGSLIGNKVVVNEFVAF--------------IQLIEVKEQLSAHSQAIVTF 348
           G+PW+EA+ AGS IG K+VVNEFVA+              I + E    +S  ++AIV+F
Sbjct: 303 GVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAIVSF 362

Query: 349 ALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL 405
           ALCGFAN+S++AIL+GGLG++ P RR  +++ G RA+ AG LANLMSA++AG+ L++
Sbjct: 363 ALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIAGSLANLMSATLAGLFLAI 419