Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., nucleoside transporter (RefSeq) from Shewanella loihica PV-4

 Score =  435 bits (1119), Expect = e-126
 Identities = 226/417 (54%), Positives = 307/417 (73%), Gaps = 15/417 (3%)

Query: 4   VMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGA 63
           ++ SL+G+  +L + +L S N+K IN+RTV  AL +Q FFA  VLYVP GK+ L  V+  
Sbjct: 3   ILMSLVGVVVLLAIGFLLSNNKKAINMRTVFGALAIQAFFAGFVLYVPIGKDILKSVSDG 62

Query: 64  VSQLINYGQDGIGFVFGGLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIG 123
           VS +I Y Q+GIGF+FG LAN  VGF+FAINVL +I+FFS+LI+ LY+LGIM  +I +IG
Sbjct: 63  VSSVIGYAQNGIGFLFGDLANFKVGFIFAINVLPVIVFFSSLIAVLYYLGIMQWIIRIIG 122

Query: 124 GGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLASVAGGTL 183
           GGLQK LGT R ES+SATANIFVG  EAPLVV+P++  MT S+ FA+M GGLAS+AG  L
Sbjct: 123 GGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIATMTQSELFAIMVGGLASIAGSVL 182

Query: 184 VGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVEAIA 243
            GYA +GV + YL+AA+FM+AP GLLMAK+M PETE     + +   D  K  NV++A A
Sbjct: 183 AGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEKTVNEMDELPEDPDKPANVLDAAA 242

Query: 244 DGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIE-LSFELIMGYVFAPVAWLI 302
            GA SG+ +A+ VGA LLAFV +IA++NG++G   G FG E ++ ELI+GY+F P+A+LI
Sbjct: 243 AGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVTGLFGAEGITLELILGYIFMPLAFLI 302

Query: 303 GIPWHEAITAGSLIGNKVVVNEFVAFIQ-------------LIEVKEQ-LSAHSQAIVTF 348
           G+PW+EA+ AGS IG K+VVNEFVA++              L+E     ++  ++AI++F
Sbjct: 303 GVPWNEALIAGSFIGQKIVVNEFVAYLNFAPYLKDVADGGLLVEATNAVMTDRTKAIISF 362

Query: 349 ALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL 405
           ALCGFAN+S++AIL+GGLG++ P RR  +++ G RA+ AG LANLMSA++AG+ L+L
Sbjct: 363 ALCGFANLSSIAILLGGLGAMAPTRRHDLAKLGIRAVIAGSLANLMSATLAGLFLAL 419