Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., nucleoside permease nupC from Caulobacter crescentus NA1000

 Score =  250 bits (639), Expect = 5e-71
 Identities = 150/417 (35%), Positives = 240/417 (57%), Gaps = 23/417 (5%)

Query: 5   MSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGAV 64
           + +L G+   L + WL S NRK         A+++Q+   L++  +P  ++ L  V GAV
Sbjct: 7   VQALAGLALTLGLCWLVSENRKRFPWGLAIGAVVIQVLLVLVLFGLPQAQQMLRGVNGAV 66

Query: 65  SQLINYGQDGIGFVFGGLANGS---------VGFVFAINVLGIIIFFSALISGLYHLGIM 115
             L    Q G  FVFG LA G           GF+FA  VL +I+   AL + L+H  I+
Sbjct: 67  EGLAASTQAGTAFVFGFLAGGDQPYPVSNPGAGFIFAFRVLPVILVVCALSALLWHWKIL 126

Query: 116 PKVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGL 175
             +    G   QK LG     +L+  A IF+G +E P+ ++ YL K++ S+ F ++  G+
Sbjct: 127 KWLAQGFGFVFQKTLGLRGPPALATAATIFMGQVEGPIFIRAYLDKLSRSELFMLIAVGM 186

Query: 176 ASVAGGTLVGYASLGVEL-----NYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDEL 230
           A V+G T+V YA++  ++      +++ A+ +SAPAG+L+A+I++P      +A    +L
Sbjct: 187 ACVSGSTMVAYATILADVLPNAAAHVLTASIISAPAGVLLARIIVPSDPMEKSA----DL 242

Query: 231 DLPKSTNV----VEAIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELS 286
           DL          ++A+  G   G++IA+ VGATL+ FV++  +++ +LG F    G  LS
Sbjct: 243 DLSTEDKTYGSSIDAVMKGTTDGLQIALNVGATLIVFVALATMVDKVLGAFPPVGGEPLS 302

Query: 287 FELIMGYVFAPVAWLIGIPWHEAITAGSLIGNKVVVNEFVAFIQLIEVKEQ-LSAHSQAI 345
               +G VFAP+AW +GIPW EA TAG L+G K+++ EF AFIQL +V E  L   ++ I
Sbjct: 303 IARGLGVVFAPLAWSMGIPWKEAGTAGGLLGVKLILTEFTAFIQLSKVGEALLDERTRMI 362

Query: 346 VTFALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVI 402
           +T+ALCGFANI ++ + + G   LVP+RR  +    ++A+ AG LA  ++AS+ G++
Sbjct: 363 MTYALCGFANIGSVGMNVAGFSVLVPQRRQEVLGLVWKAMMAGFLATCLTASLVGLM 419