Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) from Shewanella sp. ANA-3

 Score =  442 bits (1137), Expect = e-129
 Identities = 225/417 (53%), Positives = 308/417 (73%), Gaps = 15/417 (3%)

Query: 4   VMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGA 63
           ++ SL+G+  +L + +L S N+K INLRTV  AL +Q  F   VLYVP GK+ L  V+ A
Sbjct: 3   ILMSLVGVVVLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVSDA 62

Query: 64  VSQLINYGQDGIGFVFGGLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIG 123
           VS +I Y Q+GIGF+FG LAN  +GF+FA+NVL +I+FFS+LI+ LY+LGIM  +I +IG
Sbjct: 63  VSSVIGYAQNGIGFLFGDLANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGIMQWIIRIIG 122

Query: 124 GGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLASVAGGTL 183
           GGLQK LGT R ES+SATANIFVG  EAPLVV+P++  MT S+ FA+M GGLAS+AG  L
Sbjct: 123 GGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGSVL 182

Query: 184 VGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVEAIA 243
            GYA +GV + YL+AA+FM+AP GLLMAK+M PETE     + +   D  K  NV++A A
Sbjct: 183 AGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEVAKNDMDELPEDPDKPANVLDAAA 242

Query: 244 DGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIE-LSFELIMGYVFAPVAWLI 302
            GA SG+ +A+ VGA LLAFV +IA++NG++G  GGWFG+E L+ ELI+GY+F P+A+LI
Sbjct: 243 AGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLI 302

Query: 303 GIPWHEAITAGSLIGNKVVVNEFVAFIQ--------------LIEVKEQLSAHSQAIVTF 348
           G+PW+EA+ AGS IG K+VVNEFVA++               + +    ++  ++AI++F
Sbjct: 303 GVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGMIVADTGLAMTDRTKAIISF 362

Query: 349 ALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL 405
           ALCGFAN+S++AIL+GGLG++ P RR  +++ G RA+ AG LANLMSA+IAG+ L++
Sbjct: 363 ALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIAGSLANLMSATIAGLFLAI 419