Pairwise Alignments

Query, 846 a.a., chitinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1022 a.a., Glycoprotein gp2 from Pseudomonas fluorescens FW300-N2E2

 Score = 78.6 bits (192), Expect = 2e-18
 Identities = 74/244 (30%), Positives = 111/244 (45%), Gaps = 24/244 (9%)

Query: 179 PTVTLTSPTGSEQLTVGDVLAVAANATDSDGTVNAVEFYVDGQLVVIDSSEPYQFNW-NA 237
           PTVTLT+P       V   +++AANA  S G+++ VEFY    L+   +  P+ F W N 
Sbjct: 44  PTVTLTTPASGASFIVPATISLAANAATSVGSISKVEFYQGTTLLSTATLAPFAFKWTNV 103

Query: 238 AVGSHTFKAKAIDNDNLSTLSQEVTLTVGSGSNAGCAGLPVYSVGTA-YSAGQLVQNKNQ 296
           + G+++  AKA D+ N+ST S  V++TVG+GS         YS   A + AG      + 
Sbjct: 104 SPGTYSLTAKATDSQNVSTTSPAVSITVGTGSIG-------YSYDVAGHLAGVTNSTASA 156

Query: 297 KYRCDIAGWCSSSSGWAY-EPGVGSYWKEAWSGLGACSTPPVVTLTN----PTANQVILA 351
           +Y  D+ G  ++   +A   P + ++        G+  T   +   N     + N V   
Sbjct: 157 EYNYDVVGNITAIKAYAAGNPSILTFSPVR----GSVGTTVTIDGNNFSSTVSQNTVQFN 212

Query: 352 GSTV-SVAAQASDADGSVMQVEFFAGNNSLGVVTQAPYAVNWLATTTGNQTLKAVATDND 410
           G T  SV    S  +   + V   A   S+ V T A       AT+TGN T+ A      
Sbjct: 213 GVTASSVTIDPSYPNRLTVVVPSGATTGSVNVTTPA-----GSATSTGNFTVAASPAPTI 267

Query: 411 SNTS 414
           SN S
Sbjct: 268 SNLS 271



 Score = 78.2 bits (191), Expect = 2e-18
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 23/198 (11%)

Query: 310 SGWAYEPGVGSYWKEAWSGLGACSTPPVVTLTNPTANQVILAGSTVSVAAQASDADGSVM 369
           S W Y   V + W  + +  G  S  P VTLT P +    +  +T+S+AA A+ + GS+ 
Sbjct: 19  SEW-YRLVVMTGWMLSMAFTGQLSAAPTVTLTTPASGASFIVPATISLAANAATSVGSIS 77

Query: 370 QVEFFAGNNSLGVVTQAPYAVNWLATTTGNQTLKAVATDNDS-NTSESAVSVTVSDQDLV 428
           +VEF+ G   L   T AP+A  W   + G  +L A ATD+ + +T+  AVS+TV      
Sbjct: 78  KVEFYQGTTLLSTATLAPFAFKWTNVSPGTYSLTAKATDSQNVSTTSPAVSITVG----- 132

Query: 429 VSLTSPTSGQTVGLGKPVNIAADATSLTNNVAKVEFVVNGAVVATDTTEPFAYSWTPSAI 488
                     T  +G   ++A     +TN+ A  E+  N  VV   T      +  PS +
Sbjct: 133 ----------TGSIGYSYDVAGHLAGVTNSTASAEY--NYDVVGNITAIKAYAAGNPSIL 180

Query: 489 GNYTVAAKATDAAGTSVT 506
                 +    + GT+VT
Sbjct: 181 ----TFSPVRGSVGTTVT 194



 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 33/86 (38%), Positives = 55/86 (63%)

Query: 429 VSLTSPTSGQTVGLGKPVNIAADATSLTNNVAKVEFVVNGAVVATDTTEPFAYSWTPSAI 488
           V+LT+P SG +  +   +++AA+A +   +++KVEF     +++T T  PFA+ WT  + 
Sbjct: 46  VTLTTPASGASFIVPATISLAANAATSVGSISKVEFYQGTTLLSTATLAPFAFKWTNVSP 105

Query: 489 GNYTVAAKATDAAGTSVTSSAAAISV 514
           G Y++ AKATD+   S TS A +I+V
Sbjct: 106 GTYSLTAKATDSQNVSTTSPAVSITV 131



 Score = 66.2 bits (160), Expect = 9e-15
 Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 24/234 (10%)

Query: 71  WQILGQCDGGANNPPQVSIQSPLNNAKIPQGSVVGLQANASDSDGSITQVEFLVGTQRIA 130
           W +     G  +  P V++ +P + A     + + L ANA+ S GSI++VEF  GT  ++
Sbjct: 30  WMLSMAFTGQLSAAPTVTLTTPASGASFIVPATISLAANAATSVGSISKVEFYQGTTLLS 89

Query: 131 IDQQAPYQVDWT-ATLGATSVTAIATDNQG-ATTSSTVNISVTPTG------NPVPPTVT 182
               AP+   WT  + G  S+TA ATD+Q  +TTS  V+I+V  TG      +       
Sbjct: 90  TATLAPFAFKWTNVSPGTYSLTAKATDSQNVSTTSPAVSITV-GTGSIGYSYDVAGHLAG 148

Query: 183 LTSPTGSEQL---TVGDVLAVAANATDSDG--TVNAVEFYVDGQLVVIDSSEPYQFNWNA 237
           +T+ T S +     VG++ A+ A A  +    T + V   V G  V ID +     N+++
Sbjct: 149 VTNSTASAEYNYDVVGNITAIKAYAAGNPSILTFSPVRGSV-GTTVTIDGN-----NFSS 202

Query: 238 AVGSHTFKAKAIDNDNLS---TLSQEVTLTVGSGSNAGCAGLPVYSVGTAYSAG 288
            V  +T +   +   +++   +    +T+ V SG+  G   +     G+A S G
Sbjct: 203 TVSQNTVQFNGVTASSVTIDPSYPNRLTVVVPSGATTGSVNVTT-PAGSATSTG 255