Pairwise Alignments

Query, 846 a.a., chitinase from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., chitinase A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (278), Expect = 1e-28
 Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 36/310 (11%)

Query: 524 LIGYWHNFVNGAGCP------IRLADMSQAWDVIDIAFAENDRNSTGTVH-FNLYAGDIY 576
           ++GYWHN+  GAG        + LA ++  ++V+DI+F +    +TG++  F L      
Sbjct: 9   VVGYWHNWCGGAGYKGGVAPCVSLAQVNPQYNVVDISFMKV-YGATGSIPTFKL------ 61

Query: 577 SSCPALDPAQFKQDMKALQAKGKVFVLSLGGAEGTITLNTDQDEANFVSSLTALIKEWGF 636
                L  AQF   +  L  +G+  +++LGGA+  I L   Q E +  + +  L++++GF
Sbjct: 62  DPAVGLSEAQFIDQIGELNRQGRAVLIALGGADAHIELRKGQ-EHDLANEIIRLVEKYGF 120

Query: 637 DGLDVDLESGSNLVHGSQIQARLG-RALKQIEKNIGGDMFLTMAPEHPYVQGGMVAYSGI 695
           DGLD+DLE  +     +QI      R +K   +    +  +TMAPE PY+  G       
Sbjct: 121 DGLDIDLEQAAVTAADNQIVIPAALRIVKDHYRKQQKNFLITMAPEFPYLTTG------- 173

Query: 696 WGAYIPVINEVRDTLDILHVQLYNNGGLPNPYTPSAAPEGSVDMMVAQSKMLIEGFTLAN 755
            G Y+P IN +    D ++ Q YN GG    Y          +  + Q  +      L N
Sbjct: 174 -GKYVPYINALEGYYDWINPQFYNQGG-DGIYIEGIGWIAQNNDSLKQEFIYHISDALVN 231

Query: 756 GTR-FEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCLTKGTRCGTIKPAFAYPNYA 814
           GT  F  +  D++  G+P+   +A +G     N L A     K                 
Sbjct: 232 GTNGFTKIPHDKLVFGIPTNIDAAATGYVSDPNALFAAFEQLKNQG----------QPLR 281

Query: 815 GVMTWSINWD 824
           G+MTWS+NWD
Sbjct: 282 GLMTWSVNWD 291



 Score = 73.6 bits (179), Expect = 4e-17
 Identities = 71/301 (23%), Positives = 111/301 (36%), Gaps = 93/301 (30%)

Query: 30  VWDSSTVYVGSDKVQKTNTAYQARYWTQGNDPVTHSGQWDAWQILGQCDGGANNPPQVSI 89
           +W +S +Y+G D V      + A +WTQG  P   +G+W  W+  G  D  +  PP ++ 
Sbjct: 487 LWSASKIYLGGDTVNYAGKIWLAGWWTQGEQPDL-AGEWGVWKSKGDSDCDSGLPPVIT- 544

Query: 90  QSPLNNAKIPQGSVVGLQANASDSDGSITQVEFLVGTQRIAIDQQAPYQVDWTATLGATS 149
                    P  +V GL ++   + G ++ + F V T +                  A  
Sbjct: 545 ---------PNFTVSGLASSYILNQGQVS-INFNVNTNQ------------------AME 576

Query: 150 VTAIATDNQGATTSSTVNISVTPTGNPVPPTVTLTSPTGSEQLTVGDVLAVAANATDSDG 209
           +TA  T  Q    S+T  I+    GN        +   G+ Q+ +        +A D + 
Sbjct: 577 LTANLTQEQRILASTTATIN----GNGAMVLQAESLEAGAYQVVI--------SAKDKNL 624

Query: 210 TVNAVEFYVDGQLVVIDSSEPYQFNWNAAVGSHTFKAKAIDNDNLSTLSQEVTLTVGSGS 269
           T +     V G     D SEP ++                                    
Sbjct: 625 TQSYNVSLVQGD----DGSEPVEY------------------------------------ 644

Query: 270 NAGCAGLPVYSVGTAYSAGQLVQNKNQKYRC---DIAGWCSSSSGWAYEPGVGSYWKEAW 326
                  P Y  G  Y AG +V N    Y+C     +GWCS S+ + Y PG GS W++AW
Sbjct: 645 -------PAYVAGNQYQAGNIVTNAGGVYQCRPWPNSGWCSGSAPY-YAPGTGSAWQDAW 696

Query: 327 S 327
           +
Sbjct: 697 T 697