Pairwise Alignments

Query, 368 a.a., cytochrome C from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., tetraheme cytochrome c (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  180 bits (457), Expect = 5e-50
 Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 16/360 (4%)

Query: 22  IGWVTLGGSAAVMHYTSSTEFCLSCHSMEI-PFKEYQGSVHFSNAKGIRAECADCHIPSD 80
           +G +  GG    +  T++  FC+SCHSME  P++E Q +VH+SN  G+RA C DCH+P +
Sbjct: 30  MGIIFWGGFNTALEATNTEAFCISCHSMESKPYQELQETVHWSNHSGVRATCPDCHVPHN 89

Query: 81  PIGYFVTKVRATKDIYHEFVTGKIDTPEKYEAHRQELAEMVWQQMRGNDSATCRSCHDFD 140
                  K+ A+ D++  ++   ++TPEK+EA R E+A   W++   ++S  C++CH+++
Sbjct: 90  WSRKIARKMEASHDVWG-WLFNTVNTPEKFEAKRLEMASREWKRFDRDNSLACKNCHNYN 148

Query: 141 AMEPFEQSHEAVKMHEYAKANNQTCIDCHKGVAHFAPE------AELDSKAFETLMAFTE 194
           +M+    S  A K  + A   +Q+CIDCHKG+AH  PE       EL ++    + +   
Sbjct: 149 SMKWESMSPLAQKQMKRAAEIDQSCIDCHKGIAHHLPEMGTARAPELIAEVGAGVSSLET 208

Query: 195 KTAADAQRVYPVTTIAMG--ELGTINPTTALDVVSTKGTERTVQINAYQMK-GAEQVLYM 251
                +    P+     G  E GT+N  T + V+ TKG    + I+ ++ K GA +V+YM
Sbjct: 209 NQTYYSALTKPLFFSEKGDVEAGTLNVATKVKVLETKGKRIKIGIDGWRKKIGAGRVIYM 268

Query: 252 GEGQRAVVATLTE---QGQKALQAQDYKTDAY-GNQWRAVNLTA-TITSPVVDSLEPVWS 306
             G   + A L++   + +  +Q  + K D   G +W+ V     T    ++  L+P+W 
Sbjct: 269 DFGVNILSAQLSKDAAETEGVIQTFEEKEDPMTGLKWQRVEAQIWTDKDYLLTELQPLWG 328

Query: 307 YAEQLDNVYCATCHAKIPASHFTVNAWGPVAKSMGERTDISAENLEILTKFFQHHAKDMV 366
           YA       C+ CH +   +HF  N W  + + M    ++  +   ++ K+ Q H+   V
Sbjct: 329 YARDTFRSSCSVCHTQPDEAHFDANTWPGMFQGMLAFVNMDQDTQALVQKYLQEHSSTFV 388