Pairwise Alignments

Query, 815 a.a., molybdopterin guanine dinucleotide-containing S/N-oxide reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., nitrate reductase (RefSeq) from Shewanella loihica PV-4

 Score = 87.4 bits (215), Expect = 3e-21
 Identities = 189/827 (22%), Positives = 306/827 (37%), Gaps = 153/827 (18%)

Query: 4   ITRRGFLKGTGMAAGAMAFTSFSPLSI---ASDNARGKGVLTAGRMGPLLCEV----QDG 56
           I+RR FLK     A A       P+ I   A  N   K      R   + C V     +G
Sbjct: 3   ISRREFLKANAAVAAATTVGVTLPVKIVEAAEQNDNIKWDKAPCRFCGVGCSVLVGTNNG 62

Query: 57  KMVATKNALAQTVPNSLQSTG----PDQVYTQARVKYPMVRKGFLANPAAPKGVRGSDEF 112
           K+VATK      V   L           +Y + R+  P++R   + +    K      EF
Sbjct: 63  KVVATKGDPESPVNKGLNCIKGYFLSKIMYGKDRLTTPLLR---MKDGQYDK----EGEF 115

Query: 113 VRVSWDDAYRLIHEQHMRIRKTYGPASV-FAGSYGWRSSGVLHKAQTLLQRYMSMAGGYS 171
             VSWD A+  + E+     KT GP +V   GS  W          T+ + Y +     +
Sbjct: 116 TPVSWDKAFDTMAEKWKNTLKTKGPTAVGMFGSGQW----------TVWEGYAASKLHKA 165

Query: 172 GHLGDYSTGAAQIIMPHVVG----SIEVYEQQTTYPVVLEHSDVVVLWGLNPINTLKIAW 227
           G L +     A+  M   VG    +  + E    Y   LE +D  VLWG N      I W
Sbjct: 166 GFLTNNIDPNARHCMASAVGGFMRTFGIDEPMGCYD-DLEAADQFVLWGANMAEMHPILW 224

Query: 228 SSTDCAGLEFFHQLKKSGKTIIGIDPIRSETIEFFGEQAQWIAPHPMTDVAMMMGIAHSL 287
           +    +      +L K    +  +    + + +       +    P +D+ ++  IA+ +
Sbjct: 225 ARLSDS------RLSKPNSRVHVLSTFENRSFDLADNPMVF---RPQSDLVILNFIANYI 275

Query: 288 IKQGKHDKAFLDKYT--------VGYDRFEAYLL---GKEDGVEKSA------------- 323
           I+ G  +K F+ K+T        +GY     + L    K  G  KS              
Sbjct: 276 IQNGAVNKEFVSKHTKFALGTTDIGYGLRPDHPLEKKAKNPGNGKSTAISFDEYAKFVST 335

Query: 324 ---QWAEGICGVPAKQLETLAEIFSNHRTMLMAGWGMQRQQY--GEQRHWMVVTLAAMLG 378
              ++A  + GV  ++LETLA+ +++    +M+ W M   Q+  G   + M+  +  + G
Sbjct: 336 YTLEYAAKMSGVEPEKLETLAKAYADPSVKIMSLWTMGINQHVRGVWANNMLYNIHLLTG 395

Query: 379 QIGLPGGG-FGFSYHYSNGGNPARDAGV----LPAISAAIGGGSSAGND--WAISGATQS 431
           +I  PG   F  +   S  G  AR+ G     LPA          A  +  W +   T  
Sbjct: 396 KIATPGNSPFSLTGQPSACGT-AREVGTFAHRLPADMVVANPKHRAVTEKLWQLPEGT-- 452

Query: 432 FPVARIVEALENPGGAYQHNGHTLTFPEIKMIWWAGGANFTHHQDTN-RLIKAWQKPE-L 489
                       PG         L   ++   W     N     + N  +   ++ P+  
Sbjct: 453 --------IPPKPGFHAVLQSRMLKDGKLNCYWTMCTNNMQAGPNINDEIYPGFRNPDNF 504

Query: 490 IVISEPYWTAAAKHADIVLPITTTFE-------------------------RNDLTMTGD 524
           IV+S+PY T  A  AD++LP     E                         ++DL    +
Sbjct: 505 IVVSDPYPTVTAMAADLILPTAMWVEKEGAYGNAERRTHMWHQQVKAPEGAKSDLWQLVE 564

Query: 525 YSNQHLV----PMKQVV-EPQGEARNDFDVFADMAEMIRPGGRDVFTEGKTEMEWLYGFY 579
           +S +  V    P + V  +P+   +  FDV      + +    D   E   E E  +GFY
Sbjct: 565 FSKRFKVSEVWPAELVAKKPEYADKTLFDVLFANGVINKFPTSDCKGELNDESE-AFGFY 623

Query: 580 ------KTAQKSGRAARVAMPNFSKFWEDNQL----IEMKWNAKNAQFVRYAD--FRADP 627
                 +   + GR     + +F  + E   L    +E K   +  +FV  +D   +A  
Sbjct: 624 LQKGIFEEYAQFGRGHAHDLADFDTYHETRGLRWPVVEGKETLR--RFVEGSDPYVKAGE 681

Query: 628 ILNPLGTPSGKIEIYSKTLAGFNLPDCPAHPTWLAPDEFTGNAKQGELQLMTAHAAHRLH 687
             N  G P GK  I++           P  P    P+       + +L + T       H
Sbjct: 682 GYNFYGKPDGKAVIFA----------LPYEPAAEEPN------AEYDLWMSTGRVLEHWH 725

Query: 688 SQFNYAQLREEYAIANREPIWIHPEDAASRGIQTGDLVRAYNQRGQV 734
           +    A++ E Y       I++HP+DA +RG++ GD V   + RG+V
Sbjct: 726 TGSMTARVPELYRAYPDAQIFMHPDDAKARGLKRGDEVVVASPRGEV 772