Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (347), Expect = 2e-37
 Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 6/294 (2%)

Query: 18  LKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGD 77
           L  + IF KVVE GSF+ AA   G + S +S  I+ LEK L  RLL RTTRK+ L+  G+
Sbjct: 10  LAEMAIFVKVVETGSFSEAARQSGSSPSAISRSISRLEKALATRLLQRTTRKLRLSDGGE 69

Query: 78  TFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNF 137
             ++R   ++  A   +        E  G IRI     VG F+++P + EF ++YPKV+ 
Sbjct: 70  EVFKRCQEMVAAARSVMEISGQFTQEAEGRIRISVPKAVGRFVIHPHMPEFLRRYPKVDV 129

Query: 138 DIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQD 197
           ++ L+D   DL+D ++D+ IRI +     LVGR +   +  + A+  YL          D
Sbjct: 130 ELFLEDRQVDLIDDHVDLAIRITDQPPVGLVGRQLLTIDHLLCATPQYLAEHGMPKHPHD 189

Query: 198 LEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIAS 257
           L +H  +YL     PN       +      V    ++++N     +  V   +G+GS+  
Sbjct: 190 LLEHSCIYLGA--TPNDARWKFKKGSKSVTVSVRGRYAANHTGVRLGAVLQHIGIGSLPY 247

Query: 258 FLI-DKLPDASLVRLFPDFYQIST---TMNILYPSRKNLPPRVRLFIDYLVGTL 307
           F     L    +V++  D+  +++    + +L+   + LPP++R+FIDYLV  L
Sbjct: 248 FTARHALEQGLIVQVLADWTFLASYHGGLWLLHSPTRYLPPKLRVFIDYLVACL 301