Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  155 bits (392), Expect = 1e-42
 Identities = 97/295 (32%), Positives = 153/295 (51%), Gaps = 7/295 (2%)

Query: 16  NELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTE 75
           N  + I  F  V EC  FT AAE LG++ S +S QI  LE+ L  RLL R+TR+++LT  
Sbjct: 4   NRWEGIDEFVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEA 63

Query: 76  GDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKV 135
           G TF Q    L +  EEAL +V  LASE  G +R+   +  G   + PL+  F   YP++
Sbjct: 64  GQTFLQHCQRLQDGREEALRAVGDLASEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQL 123

Query: 136 NFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTI 195
             DI+L +   DLV  +LD+ IR+G L  S LV   +AP  + + AS +YLE     +++
Sbjct: 124 RVDIELSNRPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSL 183

Query: 196 QDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSI 255
            +L +H+ +      + +  +    Q G +   +       NS   V+     G+G+  +
Sbjct: 184 SELSRHNCL------IGSSDIWQLEQNGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQL 237

Query: 256 AS-FLIDKLPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLVGTLCG 309
              ++++ L   +L+ L       +T +  LYP +++L P+VR  +DYL   L G
Sbjct: 238 PDYYVLEHLHSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLKEGLAG 292