Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

 Score =  143 bits (360), Expect = 6e-39
 Identities = 95/295 (32%), Positives = 155/295 (52%), Gaps = 8/295 (2%)

Query: 18  LKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGD 77
           L  + IF KVVE GSF+ AA  LG + S VS  I+ LEK L  RLL RTTRK+ L+  G+
Sbjct: 10  LGEMAIFVKVVETGSFSEAARQLGSSPSAVSRSISRLEKALATRLLQRTTRKLRLSDGGE 69

Query: 78  TFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNF 137
             ++R   +++ A+  +        E  G +R+     VG F+++P + EF ++YPKVN 
Sbjct: 70  EVFKRCQEMVSAAKSVMEISGQFTHEAEGLVRVSVPKAVGRFVIHPHMPEFLRRYPKVNV 129

Query: 138 DIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYL-ENAPPINTIQ 196
           ++ L+D   DL+D N+D+ IRI +   + LVGR +   +  + A+  YL E+  P +   
Sbjct: 130 ELLLEDRQVDLIDDNVDLAIRITDRPPAGLVGRQLLTIDHLLCATPQYLAEHGTPTHP-H 188

Query: 197 DLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIA 256
           DL  H  +YL     P+       +      V    ++++N     +  V   +G+GS+ 
Sbjct: 189 DLLNHSCIYLG--ETPSDARWKFKKGSKAVTVGVRGRYAANHTGVRLGAVLQHIGIGSLP 246

Query: 257 SFLID-KLPDASLVRLFPDFYQISTTMN---ILYPSRKNLPPRVRLFIDYLVGTL 307
            F     L    +V++ PD+  +++      +L+   + LPP++R+ IDYLV  L
Sbjct: 247 YFTARYALEQGLIVQVLPDWTFLASYHGGAWLLHSPTRYLPPKLRVLIDYLVECL 301