Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LyrR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  159 bits (402), Expect = 8e-44
 Identities = 94/290 (32%), Positives = 163/290 (56%), Gaps = 4/290 (1%)

Query: 16  NELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTE 75
           ++L R+++F  VVE GS T AAE LG+++S VS+ +  LE+ L   LL+RTTR+ISLT +
Sbjct: 4   SQLYRMLVFASVVEQGSLTMAAEVLGISRSMVSQHLKKLEERLGCELLHRTTRRISLTED 63

Query: 76  GDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKV 135
           G  F+     LL +A +A          + G++R+   + +G   L PL+ +F+++YP +
Sbjct: 64  GREFFHYCGELLQLARQAEAVTRPADEHLHGSLRVTAPVGLGEHNLLPLIGDFHRRYPNI 123

Query: 136 NFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYL-ENAPPINT 194
              + L+D   +L++  +D+ I+ G    S      +  F+  + AS  Y+  +  P++ 
Sbjct: 124 RLTLMLEDSKLNLLEHQIDVAIQAGWPEDSEFRAIKLGSFDEQLVASPEYVAAHGKPLHP 183

Query: 195 IQDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGS 254
             +L+ H W+     +LP +T TL N +G + +V+     S NS  G++ M   GLGV  
Sbjct: 184 -DNLQHHQWLAHASGHLP-KTWTLHNGQGEEFRVRITPFISCNSTNGLIAMALQGLGVAI 241

Query: 255 IASFLIDK-LPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYL 303
           +   L+++ L   +L  L PD++     +  L+P ++N PPRVR+F+D+L
Sbjct: 242 LPDNLVNEHLASGALELLLPDYHLREGGVYALHPYKENTPPRVRVFLDFL 291