Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Rahnella sp. WP5

 Score =  149 bits (375), Expect = 1e-40
 Identities = 88/292 (30%), Positives = 154/292 (52%), Gaps = 6/292 (2%)

Query: 14  MLNELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLT 73
           M  +L+ + +F  V ECGSFT AA   G+ KS VS +I+ LEK++ +RLLNRTTR+++LT
Sbjct: 1   MFKQLQDMALFALVAECGSFTQAASRAGLPKSSVSHRISQLEKSVGLRLLNRTTRQLNLT 60

Query: 74  TEGDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYP 133
             G+ +      ++  +E A  ++  L    SG +RI +   +G  LL  +  EF K+YP
Sbjct: 61  FAGERYLIHCQEMMQASERAELAIRRLRDNPSGRLRITSPAGLGATLLARMNVEFQKRYP 120

Query: 134 KVNFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPIN 193
            V+ ++ + D L DLV    D+ +R G+   SSL+GR +      + AS  YL   P ++
Sbjct: 121 DVSLEVSVSDALVDLVQEGFDIALRTGKPQDSSLIGRELGHSPRYLLASPAYLAQHPSLD 180

Query: 194 TIQDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVG 253
           + Q L  H  +          +  + ++    H+    + H++++ L        G G+ 
Sbjct: 181 SPQQLASHHCIAHRA-----WSEWVLHRGDTWHRWLLPAAHTTDNLLYARECALAGAGIT 235

Query: 254 SIASFLI-DKLPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLV 304
            + +FL  D++   +LVR+ P++      + ++YP RK   P +  FI++++
Sbjct: 236 LLPAFLCHDEVAKGTLVRVLPEWEAEGNDLYLVYPGRKLNSPALACFIEFML 287