Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (383), Expect = 1e-41
 Identities = 91/284 (32%), Positives = 158/284 (55%), Gaps = 3/284 (1%)

Query: 21  IVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGDTFY 80
           I +F  VVE GSF+ AA  LG+ KS VS++I+ALE+ L V+L+ RTTR++ LT  G  +Y
Sbjct: 7   IPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQYY 66

Query: 81  QRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNFDIQ 140
           +  H    + ++A  ++      V G++++      G   + PLL+EF +QYP +N ++ 
Sbjct: 67  EYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEVS 126

Query: 141 LDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQDLEQ 200
           LDD + DL+   LDMV+RIG+L  SSLV   +AP    + AS  YL +     ++ DL  
Sbjct: 127 LDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLRG 186

Query: 201 HDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIASFLI 260
           H+ ++ +             + G   ++K       N+   +  ++ +G+G+  +  +L+
Sbjct: 187 HNCLFYSYFR--GGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLV 244

Query: 261 -DKLPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYL 303
            ++L   +LV +  D+   +  +  L P R+++P R+R+FID+L
Sbjct: 245 EEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFL 288