Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (385), Expect = 7e-42
 Identities = 95/294 (32%), Positives = 162/294 (55%), Gaps = 4/294 (1%)

Query: 16  NELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTE 75
           ++L R+++F  VVE GS T AAE+L +++S VS+ +  LE     RLLNRTTR +SLT E
Sbjct: 4   SQLYRMLVFASVVEHGSLTRAAESLNISRSMVSQHLKKLEHRCQSRLLNRTTRSLSLTQE 63

Query: 76  GDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKV 135
           G +FY+    LL +A++A  S+    +E+ G+I +     +G   + P++  F++ YPKV
Sbjct: 64  GQSFYRYCAELLKLAKQAETSLQPADAELQGSITLAVPQALGDGEIAPIIKTFHQHYPKV 123

Query: 136 NFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYL-ENAPPINT 194
           +  + + D   DL +  +D+ I+IG  +  S+    +  F+  + AS  Y+  +  P++ 
Sbjct: 124 HLSLLIQDRQLDLTEHQIDVAIQIGAASQPSVNETRLGRFDEYLVASPDYVAHHGAPVHP 183

Query: 195 IQDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGS 254
             +L  H W+ L    LP       N EG + +++     + NS  G +++   GLGV  
Sbjct: 184 -DNLSHHHWIGLAGDRLPRH-WQFENSEGERVRLQLSPFINCNSLQGTLSLAMQGLGVAL 241

Query: 255 IASFLIDK-LPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLVGTL 307
           + S LI + L +  LV+L PD++     + +++P  + +PPRVR  I+ L   L
Sbjct: 242 LPSPLISQHLANGQLVQLLPDYHLGRGALYLVHPYLEVIPPRVRALIELLTERL 295