Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  155 bits (392), Expect = 1e-42
 Identities = 93/294 (31%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 15  LNELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTT 74
           +     + IF  VVECGSF+ A + LG++KS +S++I+ LE+ L ++LL RTTR +SLT 
Sbjct: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60

Query: 75  EGDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPK 134
            G  +++     + + +E L +++ L     G +RI   +  G   + PL+AEF K+YP 
Sbjct: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120

Query: 135 VNFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINT 194
           +   +Q+DD + DL+    D+ IRIGEL  SSL+ R IAP    I AS  YL       T
Sbjct: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180

Query: 195 IQDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGS 254
             +L QH+ ++ +         +  + +G+Q +V+    +  N+   +     +GLG+ +
Sbjct: 181 PCELTQHNCLFYSYFQ-DGVEWSFHSPDGMQ-RVQPKGNYQVNNSDAINQACLDGLGIAN 238

Query: 255 IASFLID-KLPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLVGTL 307
           +  F+++  L    L  L  D+      +  +YP RK  P +V + I++L+  L
Sbjct: 239 LPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKL 292