Pairwise Alignments

Query, 487 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family from Pseudomonas stutzeri RCH2

 Score = 51.2 bits (121), Expect = 7e-11
 Identities = 86/365 (23%), Positives = 141/365 (38%), Gaps = 63/365 (17%)

Query: 7   DIVIIGAGPVGLMSAYLAQRCGLNALIIDKSAEPLQVG----------RADALNARTLQL 56
           D+VI+GAG VG   A   + CGL+ +++D  A PL+V           R  AL+A + ++
Sbjct: 4   DLVIVGAGMVGSTLALALEGCGLDIVVLD--ASPLEVATFDPSGDFEPRVSALSAASQRI 61

Query: 57  LEVAKLFDDLYPLGKPCNTSSVWANGHFISRQSSWWEALEGCLH-----KHFLMLGQSFV 111
           L+    +      G      S + + H       W  +  G +H      H  +LG    
Sbjct: 62  LQRVGAWP-----GMAARRVSPYTDMHV------WDGSGTGQIHFSAETVHAEVLGHIVE 110

Query: 112 EQLLDKKLLEANAPVWRNTSVDNIELNQAGCLTH-----LSNGELIQSRFVIGADGSQSF 166
            +++   LLE      +   + N  + Q  C T      L +G  +++  VI ADG+ S 
Sbjct: 111 NRVVQDALLETMQSHGQVRLLGNARVEQLLCTTDGWQLTLVDGRELRTPLVIAADGANSA 170

Query: 167 VRRHFNVPFHIVRPEIIWAVIDGVIDSDFPKVPEIIVFQAETSDVAWIPREGEIDRFYVR 226
           +RR            +  A++  V   D P          +   +A++P E + DR +  
Sbjct: 171 IRRLAGCETR-EWDYLHQAIVTSVRCRD-PHQRTAWQRFTDHGPLAFLPLERDGDRHWC- 227

Query: 227 MDTHDFTLEQAIAKINRAMAPHQLGFKEVVWFSQFAVKESVAEHYSVDDR---------- 276
                       A+  R MA   + F+  +     A +E + E    D R          
Sbjct: 228 ----SIVCSVTEAEATRLMALDDVAFRAAL---GRAFEERLGEVLEADPRLCIPLRQRHA 280

Query: 277 -------VFLAGDACHVHSVNGGQGLNTGVADAFNLIWKL-SMVIKGQ--ASPALLKSYH 326
                  + L GDA H      GQG+N G+ DA  L   L + + +G+  A   +L  + 
Sbjct: 281 KRYVQPGLALIGDAAHTIHPLAGQGVNLGLLDAAVLAEVLRAAIARGERVADVQVLSRFE 340

Query: 327 AERQP 331
             R P
Sbjct: 341 RRRMP 345