Pairwise Alignments

Query, 487 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (NCBI) from Rhodospirillum rubrum S1H

 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 89/362 (24%), Positives = 146/362 (40%), Gaps = 32/362 (8%)

Query: 4   KITDIVIIGAGPVGLMSAYLAQRCGLNALIID-KSAEPLQV----GRADALNARTLQLLE 58
           K+ D++I+G G VG   A      G++ ++ID +  E L      GR  A+     +LL+
Sbjct: 27  KVADVLIVGGGLVGGTLACALAEKGVSVVVIDGEDPEALLAAGYDGRCSAIALACQRLLD 86

Query: 59  VAKLFDDLYPLGKPCNTSSVWANGH--FISRQSSWWEALEGCLHKHFLMLGQSFVEQLLD 116
              L+D L    +P     V   G   F+    +  +   G + ++ L L Q+ + +L  
Sbjct: 87  TIGLWDLLGGESQPILDIRVVDGGSPLFLHYAQAEAQGPMGYMVENRL-LRQAILTRLGR 145

Query: 117 KKLLEANAPVWRNTSVDNIELNQAGCLTHLSNGELIQSRFVIGADGSQSFVRRHFNVPFH 176
                  AP  R T+   +  +  G    LS+G+ +++R V+GADG +S VR    +   
Sbjct: 146 LPAATLLAPA-RMTA---LRRDLDGVSATLSDGQTVRARLVVGADGRRSQVRESAGIGIR 201

Query: 177 IV---RPEIIWAVIDG------VIDSDFPKVP-EIIVFQAETSDVAWIPREGEIDRFYVR 226
            +   +  I+  V          ++   P  P  I+      S + W  R   +      
Sbjct: 202 TLGYGQTAIVLTVEHERSHRGCAVEHFLPAGPFAILPMPGNRSSLVWTERSDLVPGLLA- 260

Query: 227 MDTHDFTLEQAIAKINRAMAPHQLGFKEVVWFSQFAVKESVAEHYSVDDRVFLAGDACHV 286
                   E   A++ R    H    + V     + +    A  Y VD R+ L GDA H 
Sbjct: 261 -----LPAEHFQAELERRFGDHLGWVRPVGPRFSYRLTLQAANRY-VDHRLALVGDAAHG 314

Query: 287 HSVNGGQGLNTGVADAFNLIWKLSMVIK---GQASPALLKSYHAERQPVAQSVIDSSGEL 343
                GQG+N G+ D   L  +L    +      +PALL  Y A R+P    ++  +  L
Sbjct: 315 MHPVAGQGMNYGLRDVAVLAERLVAAQRLGLDPGAPALLAEYEALRRPDNLLMLAITDAL 374

Query: 344 VR 345
           VR
Sbjct: 375 VR 376