Pairwise Alignments

Query, 487 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) from Shewanella loihica PV-4

 Score = 57.8 bits (138), Expect = 7e-13
 Identities = 90/369 (24%), Positives = 152/369 (41%), Gaps = 74/369 (20%)

Query: 3   TKITDIVIIGAGPVGLMSAYLAQRCGLNALIIDK-------SAEPLQVGRADALNARTLQ 55
           T + D+V++G G VG  +A    + GL+  +++        S + L + R  A++  + Q
Sbjct: 8   TLVKDVVVLGGGMVGAATALGLAQLGLSVAVVEAYGPKAYDSEQELDL-RVSAISVASEQ 66

Query: 56  LLEVAKLFDDLYPLGKPCNTSSVWANGHFISRQSSWWEALEGCLHK-HFLMLGQSFVEQL 114
           LLE          LG     S++        +    WE +EGC+ + H   +G S +  +
Sbjct: 67  LLE---------RLGA---LSALGEMRQVAYKGLETWE-MEGCITQFHSDQIGASHLGHI 113

Query: 115 LDKKLLEANAPVWRNTSV-DNIEL-----------NQAGCLTHLSNGELIQSRFVIGADG 162
           ++ +L++    +W+     DN+ L            + G    L +G  I++R ++GADG
Sbjct: 114 VENRLVQL--ALWQQFDRHDNLSLLCPAKVSQFARMEDGIRLTLEDGSEIETRLLVGADG 171

Query: 163 SQSFVRRHFNVPFHIVRPEIIWAVIDGVIDSDFPKVPEI--IVFQAETSDVAW------- 213
           + S VR+              WA I GV   D+ +   +  I  + E  DV W       
Sbjct: 172 ANSQVRQ--------------WAGI-GVTGWDYAQSAMLINIATEQEEQDVTWQQFTPKG 216

Query: 214 ----IPREGEIDRFY-----VRMDTHDFTLEQAIAKINRAMAPHQLGFK-EVVWFSQFAV 263
               +P  G+           R+        QA+ +   A  P +L  + +V+    F +
Sbjct: 217 PRSLLPLPGKHASLVWYDDASRIAQLQSLSNQALYEQIDAHFPKRLEREFKVLSKGSFKL 276

Query: 264 KESVAEHYSVDDRVFLAGDACHVHSVNGGQGLNTGVADAFNLIWKLSMVIKGQA---SPA 320
               A+ Y  DD + + GDA H  +   GQG+N G  D   LI   +  I          
Sbjct: 277 TRRHAQRY-FDDHLVILGDAAHTINPLAGQGVNLGFKDVSALIDTFADAIANHKCWWDNE 335

Query: 321 LLKSYHAER 329
           +LKSY A+R
Sbjct: 336 VLKSYQAKR 344