Pairwise Alignments

Query, 487 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (RefSeq) from Shewanella sp. ANA-3

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 82/334 (24%), Positives = 131/334 (39%), Gaps = 44/334 (13%)

Query: 1   MSTKITDIVIIGAGPVGLMSAYLAQRCGLNALIIDKSAEPLQVG----RADALNARTLQL 56
           +S++  DI I+G G VGL +A    +  LN ++ID  +     G    R  A+N  + +L
Sbjct: 2   LSSQAYDIAIVGGGMVGLATAIGLAQANLNVVVIDAQSTQAVSGEPRLRVSAINKASQRL 61

Query: 57  LEVAKLFDDL-YPLGKPCNTSSVWAN---GHFISRQSSWWEALEGCLHKHFLMLGQSFVE 112
           LE    +  L      P    +VW     G      SS  E   G +      +    + 
Sbjct: 62  LEHLGAWHYLDASRATPYQKMAVWDKDGFGKIAFDASSISEPSLGAI------IENDAIS 115

Query: 113 QLLDKKLLE-ANAPVWRNTSVDNIELNQAGCLTHLSNG-----ELIQSRFVIGADGSQSF 166
             L K+  E  N     N  ++ I   +      L+NG     E + +  VI ADG+ S+
Sbjct: 116 YALAKRASEFDNITHIENQRIERIAFGEREAWLTLANGADAEIESVSAALVIAADGANSW 175

Query: 167 VRRHFNVPFHI-----------VRPEI-IWAVIDGVIDSDFPKVPEIIVFQAETSDVAW- 213
           VR    +P              +R E+   A    V   D P +  + +++     + W 
Sbjct: 176 VREQCKIPLTFWDYGHHAIVATIRSEMPHLATARQVFLQDGP-LAFLPLYEDNLCSIVWS 234

Query: 214 IPREGEIDRFYVRMDTHDFTLEQAIAKINRAMAPHQLGF-KEVVWFSQFAVKESVAEHYS 272
           +P E   +   + +D  +  L  A           +LG  K       F ++   A H++
Sbjct: 235 VPPERATELLEMTLDQFERNLTAAF--------DGRLGICKLESERHAFPLRMRYARHFA 286

Query: 273 VDDRVFLAGDACHVHSVNGGQGLNTGVADAFNLI 306
              R+ LAGDA H      GQG+N G  DA ++I
Sbjct: 287 -RHRLVLAGDAAHTIHPLAGQGVNLGFLDAASII 319