Pairwise Alignments

Query, 431 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 28/298 (9%)

Query: 3   RIPALDSIRGLLLVLITFNHLIWYSGGTTILQMITHEPVGVFGAAEGFIFMSGLLAGMVY 62
           R+  LD  RGL+L++I  +H+     G +IL  +T     +  AAE F+F+ G      Y
Sbjct: 7   RLIELDFFRGLVLLIIVVDHI-----GGSILSRVTLHAYALCDAAEVFVFLGGFATATAY 61

Query: 63  SR--REYTDRQAAGKVWHRAFIIYKYHIAGLFIAMLWFWLGSHYFAEQVTVFGGSFSNLP 120
           +       +  A  +   R+  IY+  +    + +L   + S +  +   +      +L 
Sbjct: 62  AALAERRNETIARSRFLRRSLEIYRAFLVTAALMLLVSAVLSAFSIDGPNLATTDLDDLM 121

Query: 121 TMPFMTMLMSFLLLNKPAYLEILPLYIMYMLLFPLALYGFRRGYLKWVLALSVLIWASSG 180
             P   +    L   +P    +LP+Y  + LL P+ L    R     +LA SV +WA + 
Sbjct: 122 DTPLAALGDILLFRRQPYLASVLPMYAFFALLVPMIL-PLARSKPWLLLAGSVALWAGAP 180

Query: 181 WIQGAMLLPLFKWLSAEYIPELGY-FDPFAWQLLFFFGGALGYCKRQGELAWFHPKLVWL 239
            I     LP          P++ + F+PFAWQLLF   G L  C+   + A  H +L WL
Sbjct: 181 AI--VAYLPA--------APDMHWDFNPFAWQLLFVL-GVLARCQPVYQRASAH-RLSWL 228

Query: 240 CA--AIALVIFMAYRDLLTPLGITKQMVYAASSKPELGWLRVLSLSVWIYLISVVIRF 295
            +  A+A+V   AY  L       +     AS K  L +LR ++     +L++ +I+F
Sbjct: 229 VSLLALAVVAAAAYYKL-----FIEHEPLDASLKQNLSYLRAVNFLAIAWLVANLIQF 281