Pairwise Alignments

Query, 206 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.5 bits (184), Expect = 6e-19
 Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 8/183 (4%)

Query: 8   LFIPTFFFVS-ITPGMNMTLALTLGMSVGYRRTLWMMVGELLGVALVAVSAVVGIAAVML 66
           L I  F F S ITPG N  + +T G++ G +R++  ++G  LG   + ++  +G++AV  
Sbjct: 5   LAIALFAFSSGITPGPNNIMLMTSGVNFGVKRSIPHLMGISLGFPTMILAIGLGLSAVFQ 64

Query: 67  RYPDIFTLFKIVGASYLVYLGVQMWRSRGKLAINIEQENTYQGSDWGLLVQGFVTAIANP 126
            YP I  + K++G  YL+YL   +  S  K+      E       +  L Q       NP
Sbjct: 65  AYPIIHQVIKVIGIIYLLYLSWLIANSSSKM------EGKSIAKPFSFL-QAAAFQWVNP 117

Query: 127 KGWAFMVSLLPPFIDQSLSLAPQLTVLVAIILLSEFISMSLYATGGKGLKRLLSQAHHVR 186
           KGW   V  +  F      L PQ+  +  + L   F    ++   G  LKR+L      +
Sbjct: 118 KGWIMAVGAIATFTSVQQDLTPQVVTIATVFLCVAFPCAVVWLGFGVALKRILKNERQQK 177

Query: 187 LLN 189
           + N
Sbjct: 178 IFN 180