Pairwise Alignments

Query, 206 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 4/197 (2%)

Query: 1   MNTALLGLFIPTFFFVSITPGMNMTLALTLGMSVGYRRTLWMMVGELLGVALVAVSAVVG 60
           M T    L+      + I+PG    L+++ G+  G +R++   +G +    ++  ++  G
Sbjct: 1   MQTETWLLYFFAIVLIGISPGPIAMLSMSHGIHFGKKRSIATGLGSVSAALILMAASAAG 60

Query: 61  IAAVMLRYPDIFTLFKIVGASYLVYLGVQMW--RSRGKLAINIEQENTYQGSDWGLLVQG 118
           + A++      FT+ K  GA+YLV+LG+++   + +G+    ++ E   +G+   L  Q 
Sbjct: 61  LGAIISASEYGFTILKWCGAAYLVFLGIKLLLTKQQGQTLEVVKTEG--KGTLKQLFKQA 118

Query: 119 FVTAIANPKGWAFMVSLLPPFIDQSLSLAPQLTVLVAIILLSEFISMSLYATGGKGLKRL 178
           F+  I+NPK   F  +L P FID +    PQLT+L     L +F  + +YA+    L   
Sbjct: 119 FLVGISNPKDLLFFAALFPQFIDLTAPQLPQLTILALTWALVDFSFVMIYASMANVLAPS 178

Query: 179 LSQAHHVRLLNRIAGSL 195
           L  ++ +   +R +G +
Sbjct: 179 LKASNKLHWFDRTSGGV 195