Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  210 bits (535), Expect = 3e-58
 Identities = 146/464 (31%), Positives = 240/464 (51%), Gaps = 22/464 (4%)

Query: 179  NKQQLLYFFAAILLMLILLSYMTYRSADYQQFLAWHDPLTRLKNRNFIVKKLKKRRRNQQ 238
            N+ + +  F A+   +  L +   R  DYQ   A HDPLT L NR     +L      QQ
Sbjct: 778  NRDRQITHFVAVFADISSLKHAQAR-LDYQ---AHHDPLTGLPNRTLFESRLLAALNGQQ 833

Query: 239  E---PIALILFDLNRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAV 295
            E     A++  DL+RFK +ND++G+  GD LL  IA  L ++ R      AR+G DEF +
Sbjct: 834  ENGSQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAVRLREQLRDID-TVARLGGDEFII 892

Query: 296  LLHPCT--GNADFFIRNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASS 353
            LL       +A+   + L N      Q  +    +S ++G  +   QD  +       ++
Sbjct: 893  LLPGLQQPSDAEHIAQKLLNCFAAPFQAGEHEFFISASIGT-SLYPQDGCD------VAT 945

Query: 354  LLNNADLALNIAKKAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPI 413
            L+ NAD A+  +K     +V  YTRD+ +  +++  L  +L++ +    ++ L LS+QP 
Sbjct: 946  LVKNADAAMYRSKAKGRNRVESYTRDLTAQASERVALEHELRRAI---ERNELSLSFQPK 1002

Query: 414  LSR-DPDRLGCEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWK 472
            +S  D   +G EALIRW H  FG + P++ I +AEE G+  ++G W++++    L     
Sbjct: 1003 ISLVDNQLVGAEALIRWTHPTFGDVPPEHFIPLAEENGMILQIGDWVLERACRQLCEWND 1062

Query: 473  PHNRRLDVSINLSNS-LFDETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAII 531
             ++    +S+NL+ + L    L   +  +   H+     + LE+TE   +    ++L ++
Sbjct: 1063 AYDSLGPLSVNLAGAQLRQPNLLGRIEQLLREHQLEPGLLQLEITENFIMSQAEEALTVL 1122

Query: 532  ESLEKMKVRFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLS 591
              L+K+ V+ A+DDFGTG+SSL  L  L    LKID+SFV  +  +   A  + +I+ L 
Sbjct: 1123 HQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDQSFVRGLPDDPHDAAIVRAIIALG 1182

Query: 592  HQLGMQVVAEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEFA 635
              +   ++AEG+E LAQ + L + G ++ QGY  S P+   EFA
Sbjct: 1183 RSMQFTIIAEGVETLAQQQFLTEEGCEQIQGYIVSLPLCADEFA 1226