Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (498), Expect = 3e-54
 Identities = 154/478 (32%), Positives = 231/478 (48%), Gaps = 49/478 (10%)

Query: 184 LYFFAAILLMLILLSYMTYRSADYQQFL----------AWHDPLTRLKNRNFIVKKLKKR 233
           L   A  LL  IL + +  R+A+  Q L          A HDPLT L NR  +  ++ + 
Sbjct: 224 LAVLAIALLTSILDARLEARTAELAQSLTLANRELTQLALHDPLTGLPNRVLLADRIDQA 283

Query: 234 RRNQQEP---IALILFDLNRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGA 290
               QE     AL+  DL+ FK +ND  G+  GD LL ++A  L +  RS     ARIG 
Sbjct: 284 MHRVQEQGGCFALMFIDLDGFKPVNDAFGHHMGDLLLRDVALRLREDLRS-QDTLARIGG 342

Query: 291 DEFAVLLHPCTGNADFFIRNLWNDL-----TKLVQENDPTKRLSVAMGVVTCQTQDFTES 345
           DEF +L+       D  +R     +     T  V E+D     SV + +     Q     
Sbjct: 343 DEFVLLVQ--LAEPDDALRLAARQVGLIARTFRVAEHDLQISASVGIALYPGNGQS---- 396

Query: 346 SSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSS 405
                A  LL NAD A+  AK A +    ++   + S   K+  L + L+ + ++  Q S
Sbjct: 397 -----ADELLMNADAAMYHAKGAGKNGYSFFDASMNSNARKQLQLLQDLR-IAVEQRQFS 450

Query: 406 LYLSYQPIL-SRDPDRLGCEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWI----- 459
           LY  YQP   + +   +G EAL+RW H   G + P   I++AE+ GL   +G W+     
Sbjct: 451 LY--YQPKFDAANGQPVGAEALLRWSHPTQGLLMPDTFIDLAEKTGLIIPIGEWVLNEAC 508

Query: 460 --MQQVYLALQNDWKPHNRRLDVSINLSNSLFDET-LPTLVTTIFGHHENFLNAIILELT 516
             M++ Y+    DW+       +++NLS   F  T L   V      H+   N++ LE+T
Sbjct: 509 RQMREWYVLGYTDWR-------IAVNLSALQFCHTGLVQSVAKALETHQLPANSLTLEIT 561

Query: 517 ETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQ 576
           ET  + D   S+ +++ L  M V  ++DDFGTG+SSL  L  L  ++LKID+ FV ++  
Sbjct: 562 ETTAMSDADASMTVLQQLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKIDRGFVRDLEH 621

Query: 577 NQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEF 634
           +   A  +++IV L   LG+++VAEG+E   Q + L QLG D  QGY    P+    F
Sbjct: 622 DSDDAAIVSAIVALGQALGLRIVAEGVETDVQQDFLTQLGCDSLQGYLLGHPLPAERF 679