Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  194 bits (493), Expect = 1e-53
 Identities = 134/438 (30%), Positives = 217/438 (49%), Gaps = 31/438 (7%)

Query: 209 QFLAWHDPLTRLKNRNFIVKKLKKR--RRNQQEPIALILFDLNRFKELNDTMGYAFGDQL 266
           Q L+ HD LT L NRN + + L      +    P+ L++ DL+ FK +ND++G+  GD +
Sbjct: 427 QHLSMHDALTGLPNRNKLARHLDDALVAKEHSAPLTLLMVDLDNFKPINDSLGHPAGDAV 486

Query: 267 LINIAELLTQRCRSFAYQCARIGADEFAVLLHPC--TGNADFFIRNLWNDLTKLVQENDP 324
           L+ +A+ L   C       AR+G DEF V+L+    T   D F   L + L + +     
Sbjct: 487 LLEVAQRLRD-CTREQDLVARLGGDEFVVVLNGMEHTTEIDRFCERLIDSLQQPILYETH 545

Query: 325 TKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIESAY 384
           +  +  ++G+   + Q +           L+  AD+AL  AK   +    Y+   +    
Sbjct: 546 SLHIGASIGIAVSRRQGYVPGE-------LIRCADIALYQAKSEGKKTWCYFASQMNDQI 598

Query: 385 NKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEALIRWQHSEFGYINPQYLI 443
             +R L   L+Q +    ++   L +QP  + D   +   EAL+RWQH   G ++P   I
Sbjct: 599 QHRRQLESDLRQAV---KKNEFVLHFQPRYTVDGREIVAVEALVRWQHPTQGLLSPDAFI 655

Query: 444 EIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLFD------ETLPTLV 497
            +AE+  L   L  W++++        W      L VS+NLS + F+      +    L+
Sbjct: 656 PLAEQTDLIVPLSRWVLREACETALT-WPGE---LMVSVNLSPAQFERSDVVEDVRQVLI 711

Query: 498 TTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLN 557
            T F       + + LE+TE + ++D   +L ++ +L+++ VR  +DDFGTG+SSL  L 
Sbjct: 712 ETRFP-----ASRLELEITENVMLNDVDGALQVMNALKELGVRLNMDDFGTGYSSLGYLR 766

Query: 558 HLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGV 617
              F  +KIDK F+ +M+ +      + +I+NL   +G+ V AEG+E LAQL  L     
Sbjct: 767 TYPFDGIKIDKRFIASMSNSSNDRAVVQAIINLGKAMGLTVTAEGVETLAQLGSLGSDQC 826

Query: 618 DEFQGYYFSRPITKTEFA 635
            E QGY+ SRPI K  FA
Sbjct: 827 HEVQGYFLSRPIDKQAFA 844