Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  191 bits (485), Expect = 1e-52
 Identities = 142/446 (31%), Positives = 229/446 (51%), Gaps = 26/446 (5%)

Query: 209 QFLAWHDPLTRLKNRNFIVKKLKKR---RRNQQEPIALILFDLNRFKELNDTMGYAFGDQ 265
           Q LA+HDPLT L NR  ++ +L ++    ++Q    AL+  DL+ FK +ND++G+  GD 
Sbjct: 284 QHLAYHDPLTGLPNRALLLDRLSQQVSLLQHQNLRGALLFLDLDHFKHINDSLGHPVGDS 343

Query: 266 LLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFF---IRNLWNDLTKLVQE- 321
           +L  IA  L    R      AR+G DEF VL+    G+ D     +R L ++L  L+ E 
Sbjct: 344 VLSIIAARLEASVRQ-EDTVARLGGDEFVVLICGLEGSQDEVTRQVRELADNLRNLLAEP 402

Query: 322 ---NDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTR 378
              +    +++ ++GVV       T +        LL  AD+AL  AK        ++  
Sbjct: 403 MFLDGHRLQVTPSIGVVLIPDDGLTPAD-------LLKRADIALYRAKDCGRNASQFFHV 455

Query: 379 DIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRLGCEALIRWQHSEFGYIN 438
            ++ A +++  L   L+ L L  N+  L+   Q +  R+    G EAL+RWQH E+G + 
Sbjct: 456 SMQQAVSQRLRLENDLR-LALTRNEFHLHFQAQ-VDCRNEYITGAEALLRWQHPEYGLLA 513

Query: 439 PQYLIEIAEEYGLGKKLGAWIMQQVY----LALQNDWKPHNRRLDVSINLSNSLF-DETL 493
           P   ++I EE G+  ++G+ I+ +      L L+    P NR L + +N+S   F     
Sbjct: 514 PDQFVQILEESGMILEVGSHILNEACKTGGLLLRQGLIPENRFL-MGVNISPRQFLQHDF 572

Query: 494 PTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSL 553
              V      H+   + + LE+TE + I +   ++  + SL+ + V FA+DDFGTG+SSL
Sbjct: 573 IERVERSLTLHQLPASMLKLEITEGIVIQNLDDTILKMLSLKALGVSFAMDDFGTGYSSL 632

Query: 554 YQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLK 613
             L  L    LKID+SFV +   +   A  I +IV ++  L + V+AEG+E   QL  L+
Sbjct: 633 TYLKRLPVDTLKIDQSFVQDATNDPNDAEIIRAIVAMAQSLNLNVIAEGVETSEQLAFLE 692

Query: 614 QLGVDEFQGYYFSRPITKTEFATFCD 639
           ++G   +QGY FS P+   +F +  +
Sbjct: 693 KVGCYTYQGYLFSEPLPGPQFESLLE 718