Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 748 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  200 bits (508), Expect = 2e-55
 Identities = 139/438 (31%), Positives = 227/438 (51%), Gaps = 25/438 (5%)

Query: 203 RSADYQQFLAWHDPLTRLKNRNFIVKKLK---KRRRNQQEPIALILFDLNRFKELNDTMG 259
           R ++   ++A+HD LT L NR +++ +L    + R+++ E   ++  DL+ FK +ND+MG
Sbjct: 308 RMSEELTYIAFHDELTSLFNRAYLMNELTTAFETRKSRYERATVLFLDLDGFKVVNDSMG 367

Query: 260 YAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLL----HPCTGNADFFIRNLWNDL 315
           +  GDQLL  +A  L Q C       ARIG DEFA+LL     P T  A      + + L
Sbjct: 368 HLAGDQLLKGVANRL-QTCVRSNDVLARIGGDEFAILLMGKDQPET--AVKMAERIVSQL 424

Query: 316 TKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVY 375
              +Q       +S ++G+V+          S  +   LL +AD+A+  AKK   G+   
Sbjct: 425 NTAIQIEGQDIFISCSIGIVSA-------GESHTKPEELLRDADVAMYSAKKQGRGRWSI 477

Query: 376 YTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEALIRWQHSEF 434
           +   +  A     ++   L+Q L D +     + YQPI S + + L G EAL+RW H+  
Sbjct: 478 FNTSMREAAIDTLMIQNALRQALEDKD---FLVFYQPIYSGNCEHLVGVEALVRWNHATM 534

Query: 435 GYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLFDETLP 494
           G I+P   I IAE+ G+  +LGAW+M +    +Q  W+     LD+ +N++ S  + + P
Sbjct: 535 GIISPDAFIPIAEDLGIIHELGAWVMHKACSEVQA-WRKEFSHLDLRLNVNVSGKELSHP 593

Query: 495 TLV---TTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWS 551
             V   T I          + +E+TE++ +        I+  + ++ VR ALDDFGTG+S
Sbjct: 594 GFVDRVTRIIASTGLPATQLQIEVTESVFLYQPDAIAEILRQIRQLGVRVALDDFGTGYS 653

Query: 552 SLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQ 611
           SL  ++      +KID+SFV  M   ++    ++SI++L   L + + AEG+E   Q   
Sbjct: 654 SLGYIDRYPIDAVKIDRSFVSRMMTYERSEAIVSSILSLGRALNLDITAEGVETAEQYNL 713

Query: 612 LKQLGVDEFQGYYFSRPI 629
           L+++G   FQGY  +RP+
Sbjct: 714 LRKMGCPYFQGYLLNRPM 731