Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (495), Expect = 1e-53
 Identities = 142/454 (31%), Positives = 226/454 (49%), Gaps = 27/454 (5%)

Query: 196  LLSYMTYRSADYQQFLAW----HDPLTRLKNRNFIVKKLKKR---RRNQQEPIALILFDL 248
            L S +T + A  Q+ L W    +DPLT+L NR  ++  L +       Q    AL+  DL
Sbjct: 563  LFSDITEKKA--QEQLIWQQANYDPLTKLPNRRMLLDYLDREISLASRQNVRFALLFLDL 620

Query: 249  NRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPC--TGNADF 306
            + FKE+NDT+G+  GD+LLI  A+ + + C   +   AR+G DEF VL+      G  + 
Sbjct: 621  DFFKEVNDTLGHDMGDKLLIECADRI-KACIRDSDVVARLGGDEFTVLIRDIHDVGGVER 679

Query: 307  FIRNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAK 366
               N+   + +  Q    +  +SV++G+       F E +S   A  LL NAD A+  AK
Sbjct: 680  AASNILKAIAEPFQLGPDSAYISVSIGITL-----FPEDASTREA--LLKNADQAMYAAK 732

Query: 367  KAPEGQVVYYTRDI-ESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRLG-CE 424
            +    +  Y+T  + E A  + R++    Q L +        L YQPI+     ++   E
Sbjct: 733  EQGRNRFNYFTPSMQEQAKYRMRLI----QDLRIAIEHQQFNLVYQPIVHLQSGKVHKAE 788

Query: 425  ALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINL 484
            AL+RW H E GYI+P   I +AE+ GL  ++G+W+ +      ++        + +S+N 
Sbjct: 789  ALLRWHHPERGYISPTEFIPVAEDTGLIMEIGSWVFEHAARQCRDWHHEFGTTIQLSVNK 848

Query: 485  SNSLFDETLPTLVTTIFGHHENFLN--AIILELTETMTIDDFPQSLAIIESLEKMKVRFA 542
            S   F +        +    E  L    I +E+TE + +D        + +     ++ +
Sbjct: 849  SPVQFRDEGENFERWVALLEELELTHGGICIEITEGLLLDASSGVAEKLLTYRDAGIQVS 908

Query: 543  LDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEG 602
            LDDFGTG+SSL  L       LKID+SF  N+  +        +I+ ++ +LGM+V+AEG
Sbjct: 909  LDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNLENDASDRTLCEAIIVMAQKLGMKVIAEG 968

Query: 603  IEQLAQLEQLKQLGVDEFQGYYFSRPITKTEFAT 636
            +E   Q E LK +G D  QGY +S P+++ EF T
Sbjct: 969  VETAKQQEILKAMGCDYAQGYLYSAPVSREEFET 1002