Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 751 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  189 bits (479), Expect = 5e-52
 Identities = 140/448 (31%), Positives = 230/448 (51%), Gaps = 27/448 (6%)

Query: 197 LSYMTYRSADYQQFLAWHDPLTRLKNRN---FIVKKLKKRRRNQQEPIALILFDLNRFKE 253
           +S +    A+  Q LAWHDPLTRL NR+    I ++  K   N++  +AL+L D++ FK 
Sbjct: 312 ISLLKQTEAEVAQ-LAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKH 370

Query: 254 LNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADF-----FI 308
           +ND+ G+  GD++L++++E L     +     ARIG DEF VLL       D       I
Sbjct: 371 INDSFGHLAGDKVLLSLSERLAALLGA-EDTLARIGGDEF-VLLTQVRRRDDIPVILSAI 428

Query: 309 RNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKA 368
           +  ++  T        + RLS ++G+       + +        +LL NAD A+  AK+ 
Sbjct: 429 QRAFD--TSFDTSEGESVRLSASIGIAV-----YPDDGDN--PDTLLKNADAAMYRAKQQ 479

Query: 369 PEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILS-RDPDRLGCEALI 427
              +  +YT  +  +  ++  L   L+  +     S+L L YQP ++ R    +G EAL 
Sbjct: 480 GRNRHAFYTEQMTQSSMQQLRLQTALRGAV---KNSALSLVYQPKINLRTRKLIGVEALC 536

Query: 428 RWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQV--YLALQNDWKPHNRRLDVSINLS 485
           RW   E G ++P   I +AE  GL  ++G W++++      +  D   +  R+ V+++  
Sbjct: 537 RWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNVS-G 595

Query: 486 NSLFDETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDD 545
           + L  +     V  +        +A+ LE+TE++ +D+   ++  ++ L  M V  ALDD
Sbjct: 596 SQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDD 655

Query: 546 FGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQ 605
           FGTG+SSL  L  L  +KLKID+SFV  +  +Q       +I+ +   L + V+AEG+E 
Sbjct: 656 FGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVEN 715

Query: 606 LAQLEQLKQLGVDEFQGYYFSRPITKTE 633
             Q E L +LG  E QGY F+RP+  +E
Sbjct: 716 ETQAEFLLRLGCTEAQGYLFARPLLASE 743