Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (493), Expect = 1e-53
 Identities = 149/483 (30%), Positives = 246/483 (50%), Gaps = 26/483 (5%)

Query: 160 AIVNFTGESANSNIRMINENKQQLLYFFAAILLMLILLSYMTYRSADYQQFLAWHDPLTR 219
           AI     ES + N+  I++  +       +  L  ILL +   +S    + +A  DPLT 
Sbjct: 199 AIDKIEPESPDENLLPISDAHKDDELGLVSTKLNQILLQFGQTQSK--LRKMATRDPLTG 256

Query: 220 LKNRNFIVKKLK---KRRRNQQEPIALILFDLNRFKELNDTMGYAFGDQLLINIAELLTQ 276
           L NR  +++ +    +R R  +    L+  DL+RFK +ND++G+A GDQ L  IA LL +
Sbjct: 257 LPNRTLLLETIAVTIQRARVHKRSFTLLFIDLDRFKNVNDSLGHALGDQFLARIARLL-E 315

Query: 277 RCRSFAYQCARIGADEFAVLLHP--CTGNADFFIRNLWNDLTKLVQENDPTKRLSVAMGV 334
           R        AR+G DEF +L     C   A  F+  L   L   +Q  D +   + ++G+
Sbjct: 316 RVVGDKGTVARLGGDEFVILADEIHCADMAADFVDKLLVQLNNPIQLGDHSIHPAASVGI 375

Query: 335 VTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDI-ESAYNKKRILAEQ 393
                  + E  +   A  L+ +AD+A+  AK +   Q  ++ + + E A  + R  A  
Sbjct: 376 SL-----YPEDGNS--AEDLIRHADIAMYSAKASGSNQWAFFKQQMTERAAVRLRTEASL 428

Query: 394 LQQLLLDPNQSSLYLSYQPILSRDPDR-LGCEALIRWQHSEFGYINPQYLIEIAEEYGLG 452
              L  D       L +QP L     + +GCEALIRWQ  +   I+P   I +AEE G+ 
Sbjct: 429 HDALKND----EFVLHFQPKLDLTTGKVMGCEALIRWQ-KDGRLISPMSFIPVAEETGII 483

Query: 453 KKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLF-DETLPTLVTTIFGHHENFLNAI 511
             +G W+++Q    L++  K +N  + +++N+++  F D +L   +  +   ++   + +
Sbjct: 484 VPIGRWVLEQSCKTLRHWQKQYNFAIPIAVNVASQQFADASLVPDIKQMALRYQISPDLL 543

Query: 512 ILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHLKFSKLKIDKSFV 571
            +E+TET  + D   +++ +E L+      A+DDFGTG+SSL  L HL  + +KID+ FV
Sbjct: 544 EIEITETSLMSDVETAISKLEQLKNAGFGIAVDDFGTGYSSLSYLRHLPITTMKIDRCFV 603

Query: 572 DNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQGYYFSRPITK 631
            ++  +   A   ++I+ L  QL +++VAEGIE   QL+ LK  G    QG+YFS P+  
Sbjct: 604 TDLPNDSAIA---STILMLGKQLDLRIVAEGIENEQQLQWLKTAGCGIGQGFYFSPPLPM 660

Query: 632 TEF 634
            EF
Sbjct: 661 EEF 663