Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1491 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  196 bits (497), Expect = 8e-54
 Identities = 141/440 (32%), Positives = 219/440 (49%), Gaps = 30/440 (6%)

Query: 211  LAWHDPLTRLKNRNFIVKKLKK---RRRNQQEPIALILFDLNRFKELNDTMGYAFGDQLL 267
            LA +D LT L NR+    +L +   +    +E +AL+  DL+RFK +ND+ G+  GD LL
Sbjct: 1055 LANYDVLTGLPNRSLFAARLNQAIHKATQNEEKLALMFLDLDRFKHVNDSFGHGMGDALL 1114

Query: 268  INIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFFIRNLWNDLTKLVQENDPTKR 327
            +  A  L Q C    Y   R G DEF VL+H    +    + N     T L Q   P K 
Sbjct: 1115 VEAAARL-QSCIDPEYTLCRFGGDEFVVLIHGAEVDTLNHLAN-----TILGQIETPFKL 1168

Query: 328  LSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYT--RDIESAYN 385
                  + T          ++ +  +L+ NADLA+  AK+   G   YY+  R+ E+ Y+
Sbjct: 1169 FGREFYISTSIGISIWPDDAR-QPEALIKNADLAMYHAKEEGRGNFQYYSQERNAEALYH 1227

Query: 386  KKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDR--LGCEALIRWQHSEFGYINPQYLI 443
             +  L   L++ L    +    L YQP +  + D   +G EAL+RWQH + GYI     I
Sbjct: 1228 LR--LEADLRKAL---ERQEFCLHYQPQVDVNDDNQVIGMEALLRWQHPKDGYIRTDIFI 1282

Query: 444  EIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLF------DETLPTLV 497
            ++AE  GL   +  W+++Q  L      +   R   +S+N+S   F      D    TL 
Sbjct: 1283 KVAEACGLVIDIDKWVLRQACLDGARWSRKLKRPFKISVNISAVHFRQPDFIDHLRRTLE 1342

Query: 498  TTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLN 557
             T        +  + LE+TE + + +   +   +  L +M V+ A+DDFGTG+SSL  L 
Sbjct: 1343 ETCIP-----VENLALEITEGVLMKELHIARDHLRLLREMGVQVAIDDFGTGYSSLAYLR 1397

Query: 558  HLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGV 617
            H   + LKID+SF+ ++  NQ     ++SI+ L+  L ++VVAEG+E   QL Q+   G 
Sbjct: 1398 HFDVNLLKIDRSFLIDIADNQADQAIVSSIIELARNLKLKVVAEGVETREQLNQVLSRGC 1457

Query: 618  DEFQGYYFSRPITKTEFATF 637
               QGYYF++P+ + +   +
Sbjct: 1458 HVIQGYYFAKPMARDDMDAY 1477