Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 830 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (480), Expect = 4e-52
 Identities = 136/433 (31%), Positives = 219/433 (50%), Gaps = 20/433 (4%)

Query: 212 AWHDPLTRLKNRNFIVKKLKKRRRNQQEPIALILFDLNRFKELNDTMGYAFGDQLLINIA 271
           A HDPLT L NR  ++  L +++       AL + DL+ FK +ND +G+  GD+LLI IA
Sbjct: 394 AKHDPLTDLANRRALMDALYQQQDESGSCTALFMLDLDNFKVVNDALGHHGGDRLLIQIA 453

Query: 272 ELLTQRCRSFAYQCARIGADEFAVLLHPCTGN---ADFFIRNLWNDLTKLVQEN----DP 324
             L+    S +   AR+ ADEF VL+     +   A    + L + + +L+  +      
Sbjct: 454 ARLSSYFSSNSL-IARVAADEFVVLVKKLPEDLLGAQRRAQALASQMRQLIARSFHISGH 512

Query: 325 TKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIESAY 384
           T  LS ++G+         + S  +     L   ++AL  AK++     V Y+ +++   
Sbjct: 513 TFNLSASVGIA------IIDPSETIPPEQQLKRVNMALAQAKESGRDACVVYSSEMDKRA 566

Query: 385 NKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRLGCEALIRWQHSEFGYINPQYLIE 444
            +  ++  +L   +    +  L L YQP+L+   +    EAL+RW H + G I+P   I 
Sbjct: 567 AQNLMIRTELVHAV---TRHQLSLFYQPLLNAKGEIASVEALLRWHHPQHGAISPADFIP 623

Query: 445 IAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLF--DETLPTLVTTIFG 502
           +AE   L  +LG W++ +    ++   +   R   VSIN+S   F  DE  P L+  +  
Sbjct: 624 VAEGSALIVELGEWVLLEACRFIRGLQEQGIRPPMVSINVSARQFHQDEFAPKLLVMLKD 683

Query: 503 HHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHLKFS 562
              +  + I LELTE + + D  Q    +  L +  V  A+DDFGTG+SSL  L  L  +
Sbjct: 684 QGISPAH-IELELTEHVLLTDLQQVRQTMTQLREAGVSIAVDDFGTGYSSLSYLQELPLN 742

Query: 563 KLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQG 622
           +LK+D SF+ +M      A  + +++++SH L ++ VAEG+E  +Q EQLK    D +QG
Sbjct: 743 RLKLDASFIRDMGNGDASASIVKAMIDMSHSLNLEFVAEGVEIQSQFEQLKAYRCDLYQG 802

Query: 623 YYFSRPITKTEFA 635
           Y F RP+   E A
Sbjct: 803 YLFHRPMPGEELA 815