Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1158 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  194 bits (494), Expect = 1e-53
 Identities = 139/446 (31%), Positives = 225/446 (50%), Gaps = 22/446 (4%)

Query: 203  RSADYQQFLAWHDPLTRLKNRNFIVKKLKKR---RRNQQEPIALILFDLNRFKELNDTMG 259
            R+ ++ +FLA HD LT L NR+ +  +L++         E +AL+  DL+RFK +ND++G
Sbjct: 723  RNEEHIRFLAEHDYLTGLPNRSLLHDRLQQAIALAERNSESLALMFIDLDRFKNINDSLG 782

Query: 260  YAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADF--FIRNLWNDLTK 317
            +  GDQLL  +   + Q C   A   +R G DEF +LL       D       L   L +
Sbjct: 783  HQVGDQLLQEVGRRI-QACVRSADTVSRPGGDEFIILLPSIETPQDAARVAEKLLESLNR 841

Query: 318  LVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYT 377
              Q       ++ ++G+       F E     +  +L+ NAD A+  +K+A      ++T
Sbjct: 842  PYQLGGHELVITASIGIAV-----FPEDGRDFQ--TLVKNADAAMYYSKEAGRDSFHFFT 894

Query: 378  RDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDR-LGCEALIRWQHSEFGY 436
             D+ +   ++  L   L++ L    +    L YQP +     R +G EALIRWQH + G 
Sbjct: 895  PDMNARVFERLSLENSLRRAL---ERQEFLLYYQPQVDMPSGRVIGFEALIRWQHPQMGL 951

Query: 437  INPQYLIEIAEEYGLGKKLGAWIMQQVYLALQND-WKPHNR-RLDVSINLSNSLFDET-L 493
            ++P   I +AE+ GL   +G W++ +     QN  W+      + V++N+S   F +   
Sbjct: 952  VSPARFIPVAEDSGLIVPIGEWVLGEA--CRQNRAWQEQGMPAVPVAVNISALQFRQPQF 1009

Query: 494  PTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSL 553
               V             + LELTE+M +     +  +++ L+   VR ++DDFGTG+SSL
Sbjct: 1010 EASVERALAESGLEPAWLELELTESMMLHQGQGATDLLDRLKARGVRLSIDDFGTGYSSL 1069

Query: 554  YQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLK 613
              L  L   KLKID++FV ++  +   A   A+I+ ++H LG+ V+AEG+E  AQLE L+
Sbjct: 1070 AYLKRLPLDKLKIDQAFVRDIASDAGGAAITATIIQMAHNLGLSVIAEGVETEAQLEFLQ 1129

Query: 614  QLGVDEFQGYYFSRPITKTEFATFCD 639
                   QG+YF+RP+   +   F D
Sbjct: 1130 AHDCASAQGFYFARPMPAADIRAFWD 1155