Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  184 bits (467), Expect = 1e-50
 Identities = 128/431 (29%), Positives = 218/431 (50%), Gaps = 14/431 (3%)

Query: 212 AWHDPLTRLKNRNFIVKKLKKRRRNQQEPIALILFDLNRFKELNDTMGYAFGDQLLINIA 271
           A HD LT L NR  + + + +     Q   AL++ DL+ FK +ND++G+A GD+LL   A
Sbjct: 293 ATHDELTGLLNRFGMRQHVDRLIVGGQMSFALLVIDLDDFKTINDSLGHALGDRLLHKAA 352

Query: 272 ELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFFI-RNLWNDLTKLVQENDPTKRLSV 330
           E + +   S      R G DE+ VLL+     A   + R + +  T  +  +     +S+
Sbjct: 353 ERIVELVGSQGI-VGRPGGDEYVVLLYNVDAEAAHAMARRILDIFTDSLSVSGHEVYISL 411

Query: 331 AMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIESAYNKKRIL 390
           ++G+       + E      A++L    D+A+  AK+    +   Y   ++     +  L
Sbjct: 412 SIGIAV-----YPEDGDD--AANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLAL 464

Query: 391 AEQLQQLLLDPNQSSLYLSYQPILS-RDPDRLGCEALIRWQHSEFGYINPQYLIEIAEEY 449
            + L++ L    +    L YQP +  R     G EAL+RW   +   + PQ  I +AE+ 
Sbjct: 465 EKNLRKAL---ERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKT 521

Query: 450 GLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLFDETLPTLVTTIFGHHENFLN 509
           GL   LG +++++    + + W+    RL +++N+S   F   LP  V +          
Sbjct: 522 GLIVALGEFVLREACRQM-HAWQKRFGRLKMAVNISARQFQPGLPDTVASALADAGLDPG 580

Query: 510 AIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHLKFSKLKIDKS 569
            + LE+TET  + D   +++++E L    +  A+DDFGTG SSLY L     S +KID+S
Sbjct: 581 LLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRS 640

Query: 570 FVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQGYYFSRPI 629
           FV ++  ++  A  + ++V++   LG+ +VAEG+E  AQL+ L+ L   E QGYYFS+P+
Sbjct: 641 FVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPL 700

Query: 630 TKTEFATFCDH 640
               F  + ++
Sbjct: 701 PPHAFEAWMEN 711