Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  203 bits (516), Expect = 4e-56
 Identities = 142/443 (32%), Positives = 233/443 (52%), Gaps = 25/443 (5%)

Query: 210  FLAWHDPLTRLKNRNFIVKKLKKRRRN---QQEPIALILFDLNRFKELNDTMGYAFGDQL 266
            FLA HD LT L NR  +  +L+K  +     Q  IA++  D++ FK +NDT+G+  GD L
Sbjct: 801  FLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDML 860

Query: 267  LINIAELLTQRCRSFAYQCARIGADEFAVLL----HPCTGNADFFIRNLWNDLTKLVQEN 322
            L+ +A  L     +     AR+G DEF V+L    H         +R+  N  T L+ +N
Sbjct: 861  LLEVARRLKNIMGNDDI-VARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQ-TYLI-DN 917

Query: 323  DPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIES 382
             P    S ++G+    T   +         +L+ NAD+A+  AK A      ++T  + +
Sbjct: 918  KPLHS-SPSIGISLFPTDGDS-------VEALMKNADMAMYRAKAAGRNNYQFFTAAMNT 969

Query: 383  AYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEALIRWQHSEFGYINPQY 441
               +++ +   L+Q +     + L L YQP +     ++ G EALIRWQH E G + P  
Sbjct: 970  LVTERQQIETGLRQAIAC---NELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDR 1026

Query: 442  LIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRR-LDVSINLS-NSLFDETLPTLVTT 499
             I IAEE  +   +G W+++   LA   +W+    + L +++NLS + L  +T+   +  
Sbjct: 1027 FIPIAEEIDMIIPIGQWVLENA-LAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIIN 1085

Query: 500  IFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHL 559
            +   H+    A+ LE+TE++ +    Q+  ++  L +  +  A+DDFGTG+SSL  L  L
Sbjct: 1086 VLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLL 1145

Query: 560  KFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDE 619
               +LK+D+SFV ++  +   A   A+ ++++H+LG+ VVAEG+E  AQL  L  +G D 
Sbjct: 1146 PLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDL 1205

Query: 620  FQGYYFSRPITKTEFATFCDHYF 642
             QGYYFS+P+   +   F +  F
Sbjct: 1206 VQGYYFSKPLAADDCFRFIERNF 1228