Pairwise Alignments

Query, 508 a.a., SELO family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  417 bits (1073), Expect = e-121
 Identities = 235/487 (48%), Positives = 299/487 (61%), Gaps = 20/487 (4%)

Query: 32  FAALPQAFYTPVHPQPLQNVRWGMWNSRLAQQFGLPEAPNDELLLSLSGQQLPADFSPVA 91
           F  LP+ FY+ V+PQ + N  W  W+   A   GL + P DELL  LSG       S  A
Sbjct: 8   FTQLPE-FYSQVYPQGISNPHWLAWSDDAAALIGLHQ-PTDELLQGLSGNAAVEGASYYA 65

Query: 92  MKYAGHQFGVYNPDLGDGRGLLLAEMATKQGEVFDIHLKGAGLTPYSRMGDGRAVLRSSL 151
             Y+GHQFG Y P LGDGR ++L E     G  +D+ LKG G TPYSR GDGRAV+RS++
Sbjct: 66  QVYSGHQFGGYTPRLGDGRSIILGEAIGPNG-AWDVALKGGGPTPYSRHGDGRAVMRSAV 124

Query: 152 REYLCSEAMAGLGIATTRALALMSSETPVYREREERGALLVRLAHTHVRFGHFEHFFYTD 211
           RE+L SEA+  LG+ TTRALA++ S+ PV+RE +E  A+ VRLA +H+RFGHFE F +++
Sbjct: 125 REFLVSEALHHLGVPTTRALAVIGSDMPVWRESQETAAITVRLARSHIRFGHFEFFSHSE 184

Query: 212 --QHANLKLLADKVIEWHFPDCVQTSKPYAAWFSQVVERTALMIAQWQAYGFNHGVMNTD 269
             Q   L  L +  ++ H+P        Y AWF QVV+ +A MIA WQA GF HGVMNTD
Sbjct: 185 RGQADKLTQLLNFTLKQHYPHLSCDPAGYKAWFLQVVQDSAKMIAHWQAIGFAHGVMNTD 244

Query: 270 NMSILGETFDYGPFAFLDDYDPNFICNHSDYQGRYAFDQQPRIGLWNLSALAHALSPLID 329
           NMSILG++FD+GPFAFLD +  +FICNHSD  GRYAF QQP IGLWNL  LA AL+P+I 
Sbjct: 245 NMSILGDSFDFGPFAFLDTFQEDFICNHSDPDGRYAFGQQPGIGLWNLQRLAQALTPVIA 304

Query: 330 KDDLEAALGSYSERLNLHFSRLMRAKLGL-------ATQQEGDGELFADFFALLANNHTD 382
            DDL AAL  Y   L  H+  LMRAKLGL       A Q + D EL   F  L+  N  D
Sbjct: 305 SDDLIAALNQYQHALVQHYLALMRAKLGLVQQADSSAEQDQQDLELIGRFTVLMEKNQLD 364

Query: 383 YTRFLRELSCLDRQG-NEAVIDLVLDREAAKTWLTRYLERAARELGQEGRPISTRERCQA 441
           Y+   R    LD    + ++ D  +D      W   Y  R    LG+     + +++C  
Sbjct: 365 YSHTWRRFGQLDPSSLHSSLRDDFIDLNEFDAWYQVYQAR----LGKVTDVEAWQQQC-- 418

Query: 442 MRQVNPKYILRNYLAQQAIEFAERGDFEEMQRLATVLASPYAEHPEFERYAKLPPEWGKK 501
             +VNPKYILRNYLAQ+AI   + G+  ++QRL  VL  P+ E  E E  AK PP+WG+ 
Sbjct: 419 -NRVNPKYILRNYLAQEAIIAVDEGNLAQLQRLHQVLRQPFTEQIEHEELAKRPPDWGQG 477

Query: 502 LEISCSS 508
           L +SCSS
Sbjct: 478 LIMSCSS 484