Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., C4-dicarboxylate ABC transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  104 bits (259), Expect = 3e-27
 Identities = 89/329 (27%), Positives = 145/329 (44%), Gaps = 21/329 (6%)

Query: 2   FKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLE----KRVNE 57
           FK   LIAA  LA  +  A A      + +K +     D HPKG    + E    K + +
Sbjct: 3   FKRTLLIAALPLAFLAQAAHA------LELKIA-----DIHPKGYPTVMAEESMGKTLTK 51

Query: 58  EMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDV 117
           E NG+   + FP   L  + +V+E +  G +Q++  SL           +F++PF+F D 
Sbjct: 52  ETNGELTFKYFPGGVLGSEKEVIEQMQVGAIQMSRVSLGIVGPVVPDVNVFNMPFIFRDQ 111

Query: 118 DAVDRFQSSAKGEELKNAMTRR--GVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQA 175
             +        G+ + + +T    G+  L +   G + I   KP+    D KG+K RVQ 
Sbjct: 112 AHMRAVIDGDVGDAILDRITNSEFGLVALAWMDGGTRNIYTKKPVRKLEDLKGMKIRVQG 171

Query: 176 SDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHG 235
           + + +     +GAN   M   E +  LQT VIDG EN    +    +++     + T H 
Sbjct: 172 NPMFIEMMNAMGANGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKYYSLTGHL 231

Query: 236 ILDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTL 295
           IL   +V S   W+ L  D +    K       E  A  ++    +++ +  AG  V  +
Sbjct: 232 ILPEPIVMSKITWEKLTPDQQTMVRKAAKAAQAEERALWDQKSTASEEKLKAAG--VEFI 289

Query: 296 TPEQRQQWVDALKPVWQKFEKDIGADLIE 324
           T + ++ + DA  PV  K+     ADLI+
Sbjct: 290 TVD-KKPFYDATAPVRAKYGAPY-ADLIK 316