Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score =  353 bits (905), Expect = e-102
 Identities = 180/332 (54%), Positives = 240/332 (72%), Gaps = 4/332 (1%)

Query: 1   MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMN 60
           MFK      A  L+++    A   DP  I IKFSHV   +  PKG  A + +K V E + 
Sbjct: 1   MFKLTAKALACALSLSIAGLAHAADP--ITIKFSHVV-AENTPKGQGALMFKKLVEERLA 57

Query: 61  GKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV 120
           GK  +QV+PNS+L+ D K +EALL GDVQL APSL+KFE ++K  +++DLPFLF+D+ AV
Sbjct: 58  GKVEVQVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEHYSKGVQVYDLPFLFDDIAAV 117

Query: 121 DRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLV 180
           DRFQ    G+ L  +M  + + GL +WHNGMKQ+SANKP+  P DA+GLKFRVQAS VL 
Sbjct: 118 DRFQKGEAGQSLLRSMEDKNITGLGYWHNGMKQLSANKPLREPKDARGLKFRVQASAVLD 177

Query: 181 AQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL 240
            QF+ + ANP+KMSFAE Y GLQT V++G EN +SNIY QK  EVQ   TE+NHG+LDY+
Sbjct: 178 EQFKAVRANPRKMSFAEVYQGLQTGVVNGAENPYSNIYSQKMHEVQKYITESNHGLLDYM 237

Query: 241 VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGV-VRTLTPEQ 299
           V+T++K+W+GLPADVR +   ILNEVT+  N +++++ + +KQ I++AG   +  LTPEQ
Sbjct: 238 VITNTKFWNGLPADVRSELESILNEVTVAVNKQADELNQADKQRIVDAGTTEIINLTPEQ 297

Query: 300 RQQWVDALKPVWQKFEKDIGADLIEAALAANQ 331
           R+ W +A+KPVW+KFE +IGADLI+AA AANQ
Sbjct: 298 REMWREAMKPVWKKFEGEIGADLIKAAEAANQ 329