Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score =  330 bits (845), Expect = 4e-95
 Identities = 165/322 (51%), Positives = 225/322 (69%), Gaps = 2/322 (0%)

Query: 11  SILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFPN 70
           ++    SF+ A       + IKF+HV   D  PKG  A L +K   E + GK  ++V+PN
Sbjct: 8   ALACALSFSIAGLVHADPVTIKFAHVV-ADNTPKGQGALLFKKLAEERLPGKVKVEVYPN 66

Query: 71  STLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKGE 130
           S+L+ D K +EALL GDV + APSL+KFE + K  +I+DLPFLF+D+ A DRFQS  +G+
Sbjct: 67  SSLFGDGKEMEALLLGDVHMLAPSLAKFEHYAKAIQIYDLPFLFDDLAAADRFQSGPQGK 126

Query: 131 ELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFEQIGANP 190
            L  AM  + + GL +WHNGMKQ+SANKP+  P DA+GLKFRVQAS VL  QF+ + ANP
Sbjct: 127 ALLRAMEDKNITGLAYWHNGMKQLSANKPLREPKDARGLKFRVQASAVLDEQFKAVRANP 186

Query: 191 QKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTSSKWWDG 250
           +KMSFAE Y GLQT V++G ENTWSN   QK  EVQ   T ++HG++DY+V+T++K+W+G
Sbjct: 187 RKMSFAEVYQGLQTGVVNGTENTWSNYESQKVHEVQPYMTASDHGLIDYMVITNTKFWNG 246

Query: 251 LPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGV-VRTLTPEQRQQWVDALKP 309
           LP D+R +   I+ EVT E N +++ + +  +Q I  +G   +  LTPEQR QW +A+KP
Sbjct: 247 LPEDLRGELETIMEEVTAEVNRQADDLNQQARQAIAASGKTEIIELTPEQRAQWREAMKP 306

Query: 310 VWQKFEKDIGADLIEAALAANQ 331
           VW+KFE +IGA+LIEAA AAN+
Sbjct: 307 VWKKFENEIGAELIEAAQAANR 328