Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., gluconate TRAP transporter, periplasmic solute-binding component (from data) from Azospirillum brasilense Sp245

 Score =  150 bits (380), Expect = 3e-41
 Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 13/323 (4%)

Query: 6   TLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACM 65
           T +AA+ILA     AA+  D    +I+F +  +   + +G A     + + +   GK  +
Sbjct: 11  TGLAAAILAPV---AASAQDIKPRLIRFGYGLSESSN-QGRAVKFFVEDMAKRSGGKLKV 66

Query: 66  QVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQS 125
           + F +++L  D ++  AL+ G  ++   S +      K + +FDLPFLF +    D    
Sbjct: 67  KGFADASLGSDIQMQNALIGGAQEMMVGSTATLVGIVKDFAVFDLPFLFNNEQEADAVFD 126

Query: 126 SAKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQASDVLVAQFE 184
              G++L   +  +G+ GL +W NG + ++ +K P+    D KG+K RV  + V +  F 
Sbjct: 127 GPFGQKLAAKLNDKGLVGLVYWENGFRNLTNSKRPVEKVEDLKGIKLRVMQNPVYIDMFN 186

Query: 185 QIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTS 244
             GAN   +SF+E +  ++T  +DGQEN  + I   K++EVQ   T + H    ++V+ S
Sbjct: 187 GFGANAVPLSFSELFTAMETGTVDGQENPVTTIQSSKFYEVQKYLTISKHVYSPWIVLAS 246

Query: 245 SKWWDGLPADVRDQFAKILNEVTI-ERNAESNKVEELNKQ---YIIEAGGVVRTLTPEQR 300
            +W+DGL AD R    KI+NE  +  R+ E     E +KQ   Y+ + G  +  L+  + 
Sbjct: 247 KRWYDGLSADER----KIINEAAVASRDFERKDSREASKQSIAYLKDKGMQINELSDAEL 302

Query: 301 QQWVDALKPVWQKFEKDIGADLI 323
            +  + +KP   KF  D GADL+
Sbjct: 303 GRMREMVKPAMDKFAADGGADLL 325