Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  110 bits (274), Expect = 6e-29
 Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 12/326 (3%)

Query: 7   LIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQ 66
           L+ A++L++ +  AAA         + SH      +PK +A+    + V ++  G+  + 
Sbjct: 6   LLTAAVLSLCAGPAAAQ------TYQLSHNAAAG-NPKDVASLKFAELVEQKSEGRLKID 58

Query: 67  VFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSS 126
           V  ++   DD + +  +  G +  +A S         +  +  LPFLF+D+   +     
Sbjct: 59  VGGSAQFGDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLGLPFLFQDLKQAEAVMDG 118

Query: 127 AKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQASDVLVAQFEQ 185
             G+++  A  ++G+  L +W+NG+++ S +K  I  P+D  G+K R     + V  F  
Sbjct: 119 PVGDKIAAAAEQQGLVVLAWWNNGIRETSNSKRQITAPSDLAGMKIRTPPDQMTVDIFTA 178

Query: 186 IGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTSS 245
           +GA+P  M+F+E Y  LQ  V+DGQEN   NI+  K  EVQ   + TNH       + S 
Sbjct: 179 LGASPTPMAFSELYIALQQGVVDGQENPLINIHSSKLHEVQPYISMTNHKYESTPFLASK 238

Query: 246 KWWDGLPADVRDQFAKILNEV-TIERNAESNKVEELNKQYIIEAGGV-VRTLTPEQRQQW 303
             +D L  + +        E   + R     +   L  +  +EA GV +  + P    Q 
Sbjct: 239 IVFDALLPEDQQIIRDAAREAGQLNRQMVGEQTTRLRGE--LEAAGVKINDVDPAPFVQA 296

Query: 304 VDALKPVWQKFEKDIGADLIEAALAA 329
             ++   W+    D+  +L+ AA AA
Sbjct: 297 TQSVYDKWRAQYPDLVDELVGAAKAA 322