Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score =  139 bits (351), Expect = 8e-38
 Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 8/330 (2%)

Query: 3   KPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGK 62
           + L L   +I    S  A A  +  +  I+ S+  N D HP G     ++  ++++  GK
Sbjct: 2   RKLLLATTAIAFGLSAAAPAFAEFNDRNIRVSNGINED-HPVGNGIKAMQACLDQKSGGK 60

Query: 63  ACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDR 122
             +  F    L  D +  +AL +G  +    S S          +FDLPFLF +      
Sbjct: 61  LKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQEAYT 120

Query: 123 FQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISAN-KPILVPADAKGLKFRVQASDVLVA 181
                 G+ +   +   G+  L +W NG + +S + +P+    D +G+K RV  +++ + 
Sbjct: 121 VLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQNNIFLD 180

Query: 182 QFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLV 241
            F+ +GAN   M+F E +  L+TK ID QEN +  I   K+FEVQ   TETNH    +L 
Sbjct: 181 TFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHAYTPFLF 240

Query: 242 VTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNK---QYIIEAGGVVRTLTPE 298
           + S   +D       ++ A +     + R+ E   +++LNK   + I EAG  V TL+ E
Sbjct: 241 LFSKPIFDSY---TPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVNTLSAE 297

Query: 299 QRQQWVDALKPVWQKFEKDIGADLIEAALA 328
           ++ +  +    V++K + +IGA++++A LA
Sbjct: 298 EQARIREKSMVVYEKHKAEIGAEVVDAILA 327