Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 18/296 (6%)

Query: 8   IAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQV 67
           +A ++L       AA+       ++++HV   +   + + A+   + +     G+  + V
Sbjct: 10  VAGAMLGAALLAGAASATE----LRYAHV-GAEGDIQTVYAAQAAEGIAAATGGEVTVTV 64

Query: 68  FPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFED----VDAVDRF 123
           +P S L    ++++ +  G + +     +   +   +  +F+ PF++ D    + A D  
Sbjct: 65  YPASQLGGVAEMVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGAHALAATDP- 123

Query: 124 QSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQF 183
           QSS   + +   +  +GV+ +   + G + IS+N P+  PAD  G  FR    ++ V+  
Sbjct: 124 QSSPALQAINEKLIAQGVRIVGRIYRGDRHISSNFPVKTPADLAGKPFRAVPLELWVSMV 183

Query: 184 EQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVT 243
           +  GA P  +  AE    L T V+ GQEN  + I      EVQ   + T H      V  
Sbjct: 184 KGFGAIPTPVEVAELPTALMTGVVVGQENPLTRIASNNLNEVQSHLSMTGHMRAVLAVFI 243

Query: 244 SSKWWDGLPADVRDQFAKILNE-----VTIERNAESNKVEELNKQ---YIIEAGGV 291
           + + W GL  + R    K+L+E     + +   +E++ V+EL  +    I EA G+
Sbjct: 244 NEEVWQGLSEEQRTALTKVLDEEAQKSLKMATESEADLVKELKGRGMTVITEAEGL 299